Streptomyces spinosirectus: LXH13_22890
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Entry
LXH13_22890 CDS
T08958
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspn03016
]
LXH13_22890 (thpR)
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LXH13_22890 (thpR)
Transfer RNA biogenesis [BR:
sspn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LXH13_22890 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UIR19709
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All DBs
Position
4920957..4921529
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AA seq
190 aa
AA seq
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MRLFAAVLPPDDVVRELAGEVDRLRGLPGADRMRWTGRAGWHFTLAFYGEVDDDVVPELS
ARLERAARRTEPFALAVRGAGQFGRGRALWAGAQGELRTLRLLAERAEAAGRKAGVPMGE
HRRFKAHLTLARSRDAVDVRPYVSALEDFTGRTWTVAELALVRSNLPTSGVAGEQPRYEA
VARWALGGAG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagacttttcgcggccgtgctgccgcccgatgacgtggtgcgtgaacttgccggggaa
gtggaccggttgcgcgggctgcccggggcggatcggatgcgctggaccgggcgggccggg
tggcacttcacgctcgcgttctacggggaggtcgacgacgacgtcgtaccggagctgtcg
gcgcggctggagcgggccgcgcggcgtaccgagccgttcgcgctcgccgtgcgcggtgcg
gggcagttcgggcgcgggcgggcgctgtgggcgggggcgcagggcgagctgcggacgctg
cggctgctcgccgagcgggcggaggcggccgggcgcaaggcgggcgtgccgatgggcgag
caccggcgcttcaaggcgcatctcacgctggcccgcagccgcgacgcggtggacgtgcgg
ccgtacgtgtccgcgctggaggacttcaccggccgcacctggacggtggccgagctggcg
ctcgtacgcagcaacctgccgacgtcgggtgtcgcgggggagcagccgcgctacgaggcg
gtcgcccgctgggcgctcggcggggccggttag
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