Streptomyces spinosirectus: LXH13_26375
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Entry
LXH13_26375 CDS
T08958
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03420
Nucleotide excision repair
sspn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LXH13_26375
03430 Mismatch repair
LXH13_26375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_26375
Enzymes [BR:
sspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LXH13_26375
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LXH13_26375
MMR (mismatch excision repair)
Other MMR factors
LXH13_26375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
DUF6011
C1_1
Zn_ribbon_TiaS
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UIR20342
LinkDB
All DBs
Position
5693693..5695900
Genome browser
AA seq
735 aa
AA seq
DB search
MTAATHSTLFPRVPDSADAVLEGLDPEQREVATALRGPVCVLAGAGTGKTRAITHRIAYG
VRAGILQPSSVLAVTFTNRAAGEMRGRLRQLGAAGVQARTFHSAALRQLQYFWPKAVGGS
MPRLVDRKIQLVADAAAACRIRLDRGELRDVTAEIEWSKVTQTVPADYAPAAAKAGRESP
RDPAEIAQLYSVYEDLKRDRSVIDFEDVLLLTVAVLQDRHDIAEQVRSQYQHFVVDEYQD
VSPLQQRLLELWLGERDSLCVVGDASQTIYSFTGATPDHLLDFRTRHPGATVVKLVRDYR
STPQVVHLANGLLAQARGRAADHRLELISQREPGPEPAYTEYTDEPVEAEGAARRIRELM
ESGVPASEIAILFRTNAQSETYEQALADAGIPYQLRGAERFFDRPEVRKASVALRGAARF
GGNDSLLDDVVDLPSQVRAVLSGEGWTAQPPAGSGAVRERWESLAALVNLARDFAAARAG
ATLGDLVAELDERANAQHAPTVQGVTLASLHSAKGLEWDVVFLVGVAEGMMPITYAKTDE
QIEEERRLLYVGVTRARERLYVSWSLSRSPGGRPNRRPSRFLDGLRPGSTGTAGRAAVAG
AGGVERGFTSAPAAAPRRKQRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYERLR
EWRAVQAERSGQPAFCVFTDKTLMAIAESVPDDERELARIPGVGMRKLNRYGTEVLALCA
GREPVEEAEEEDEDD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccacgctcttcccgcgggtaccggactcggccgacgcggtg
ctcgaagggctcgaccccgagcagcgcgaggtggccaccgccctgcgcggcccggtgtgc
gtgctggcgggcgccggcacgggcaagacacgggcgatcacccaccgcatcgcctacgga
gtgcgggccggcatcctgcagccctccagcgtgctggccgtcaccttcaccaaccgcgcc
gccggggagatgcgcggacgcctgcgccagctcggcgccgcaggcgtccaggcccgcacc
ttccactcggccgccctgcgccagctgcagtacttctggccgaaagcggtcggcggctcc
atgccacggctcgtcgaccgcaagatccagctcgtcgcggacgcggccgccgcctgccgc
atccgcctcgaccggggcgagctgcgggacgtcaccgccgagatcgaatggtccaaggtc
acccagaccgtccccgccgactacgcgccggccgccgccaaggccggccgtgagtccccc
cgcgacccggccgagatcgcccagctctactccgtctacgaggacctcaagcgggaccgc
tccgtcatcgacttcgaggacgtcctgctgctgacggtcgccgtcctccaggaccggcac
gacatcgccgagcaggtccgctcccagtaccagcacttcgtggtcgacgagtaccaggac
gtcagcccgctccagcagcgcctgctggagctgtggctcggcgagcgggacagcctgtgc
gtggtgggcgacgccagccagacgatctactccttcaccggagcaacccccgaccacctc
ctcgacttccgcacccgccatcccggagccaccgtcgtcaaactggtccgggactaccgc
tccaccccccaggtcgtccacctcgccaacggcctcctcgcccaggcccggggccgcgcc
gcggaccaccgcctggagctgatctcccagcgcgagccgggtcccgagcccgcctacacc
gagtacaccgacgagcccgtggaggccgagggcgccgcccgccgcatccgcgaactcatg
gagtcgggcgtcccggcgagcgagatcgccatcctgttccgtacgaacgcccagtcggag
acctacgagcaggccctggccgacgcgggaatcccctaccagctgcgcggcgccgagcgg
ttcttcgaccgccccgaggtgcgcaaggcgagcgtcgccctgcgcggcgcggcccgcttc
gggggcaacgactccctgctcgacgacgtcgtggacctgccctcccaggtccgcgccgtg
ctgtcgggggagggctggacggctcagcccccggcaggctccggcgcggtcagagagcgc
tgggaatccctcgccgccctcgtgaacctcgcgcgcgacttcgccgctgccagagccggc
gccacactcggtgacctcgtggccgaactcgacgagcgggccaacgcacagcacgccccc
accgtccagggcgtcaccctggcctccctgcactcggccaagggcctcgaatgggacgtc
gtcttcctggtcggcgtcgccgagggcatgatgccgatcacctacgcgaagaccgacgaa
cagatcgaggaggagcgccgcctcctctacgtcggcgtcacccgggcccgggagcgcctc
tacgtctcctggtcgctgtcccgctcgccgggcggccgccccaaccgccggcccagccgg
ttcctggacgggctgcgtccgggctccaccggcacggcgggccgcgccgccgtggcaggg
gcaggaggagtcgagcgcggtttcaccagcgcaccggcggccgcgccgcggcgcaagcag
cgcaccccggcacgctgccgggtgtgcgggcgcacgctcaccgacgccggcgagatgaaa
ctgatgcgttgcgaggactgcccctccgacatggacgaggggctctacgagcggctgcgg
gagtggcgcgcggtccaggcggagcgcagcgggcagcccgccttctgcgtcttcaccgac
aagaccctgatggccatcgccgagtccgttcccgacgacgagcgcgaactggcacggatc
cccggggtcggcatgcgcaagctcaatcgctacggcaccgaggtcctggccctgtgcgcc
ggccgcgagcccgtggaagaggccgaagaagaggacgaagacgactga
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