Streptomyces spinosirectus: LXH13_26670
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Entry
LXH13_26670 CDS
T08958
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspn03021
]
LXH13_26670
Transcription machinery [BR:
sspn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LXH13_26670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
HTH_24
MarR_2
NirdL-like_HTH
MarR
IF2_N
HTH_3
Sigma70_ECF
HTH_Crp_2
HTH_AraC
GerE
Motif
Other DBs
NCBI-ProteinID:
UIR20395
LinkDB
All DBs
Position
complement(5754222..5755349)
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AA seq
375 aa
AA seq
DB search
MRTGDGPVRDEERGTRELPAEGTGGSRRIRDAAGGTDGMDGIPEQARPHPEDGSTELAAP
DDGQRDREGAVQSTPLDGPYGVTPVRAEARARRRATGGTMSEHERNAEGDGQEQQGVQQA
TQHDAQDRSGARAMFIELRKLKDGSPEYAELRNRLVRMHLPLVEHLARRFRNRGEPLDDL
TQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALT
TATAELSQQHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADT
LGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLL
ARTLAQLREKLLVEE
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgaggacaggggacgggccggtgcgtgacgaagagcgcggcacacgtgagctgccggcc
gagggcacaggcgggtcccgacgcatccgggacgccgccggcggcaccgacgggatggac
ggcatccccgagcaggcccggccgcatccggaggacggctccacggagctcgccgccccg
gacgacgggcagcgggatcgggaaggtgccgtgcagagcacgcccctggacgggccgtac
ggggtcaccccggtccgcgcggaggcgagggctcgcagaagggcgacgggcggaacgatg
agcgagcacgagcgaaacgccgagggcgacggccaggagcagcagggcgtgcagcaggcc
acacagcacgacgcgcaggaccgcagcggagcccgcgcgatgttcatcgagctgcgcaag
ctcaaggacggcagcccggagtacgcggagctgcgcaaccggctggtccgtatgcacctg
ccgctcgtcgagcacctcgcacgccgcttccgcaaccgcggcgagccgttggacgacctc
acccaggtcgccaccatcggtctgatcaagtcggtcgaccgcttcgacccggagcgcggt
gtcgagttctcgacgtacgcgaccccgacggtcgtcggcgagatcaagcggcacttccgg
gacaagggctgggcggtgcgggtgccgcggcggctgcaggagctgcgcctcgcgctgacc
acggcgaccgccgagctctcgcagcagcacggccgctcccccacggtccatgagctcgcc
gagaagctggcgatctcggaggaggaggtcctggagggcctggagtcggcaaacgcctat
tccacgctgtccctggacgtccccgacaccgacgacgagtccccggccgtcgcggacacc
ctgggcgcggaggacgaggcgctggagggcgtcgagtaccgcgagtcgctcaagccgctg
ctcgaggatctgccgccgcgggagaagcgcatcctgctgctgcgcttcttcggcaacatg
acccagtcgcagatcgcgcaggaggtcggcatctcccagatgcacgtctcccgcctgctg
gcccgcaccctggcgcaactgcgcgagaagctcctggtggaggagtag
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