Streptomyces spinosirectus: LXH13_28195
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Entry
LXH13_28195 CDS
T08958
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_28195
03036 Chromosome and associated proteins [BR:
sspn03036
]
LXH13_28195
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_28195
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LXH13_28195
Chromosome and associated proteins [BR:
sspn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LXH13_28195
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LXH13_28195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
UIR20680
LinkDB
All DBs
Position
6085790..6086437
Genome browser
AA seq
215 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAAEAVDAVLDAIVRATVAGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLSGGASATVKK
AAAKKTTAKKATAKKTTAKKTTARKTTGAAKTSAAKKTTAKKATGAAKTSAAKKTTAKKA
TAKKAPAKKATAKKAPAKKSTARTTTAKKATARKR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggaggccgtcagcaggcg
gccgaggccgtcgacgcggtcctggacgccatcgtccgcgcgaccgtcgcgggggaccgg
gtctcggtcaccggcttcggttcgttcgagaaggtcgaccgtccggcccgctacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtgccgcgcttccgcgcg
ggccagggcttcaaggacctggtgagcggctcgaagaagctcccgcgcggcggcgaggtc
gccgtcaagaaggcgcccaagggcagcctgagcggcggggcttccgcgaccgtcaagaag
gccgcggcgaagaagaccaccgccaagaaggccaccgcgaagaagaccacggcgaagaag
acgacggccaggaagaccacgggcgccgccaagacctccgccgcgaagaagaccacggcg
aagaaggcgacgggcgccgccaagacgtccgcggcgaagaagacgacggccaagaaggcg
accgcgaagaaggccccggcgaagaaggcgacggccaagaaggcccccgccaagaagtcg
acggctcgcacgaccaccgccaagaaggccaccgcccgcaagaggtaa
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integrated database retrieval system
