Streptomyces spinosirectus: LXH13_28310
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Entry
LXH13_28310 CDS
T08958
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LXH13_28310 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_28310 (mutM)
Enzymes [BR:
sspn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LXH13_28310 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LXH13_28310 (mutM)
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LXH13_28310 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
UIR20702
LinkDB
All DBs
Position
6112550..6113410
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AA seq
286 aa
AA seq
DB search
MPELPEVEVVRRGLERWVAHRVVADAEVLHPRAVRRHVAGADDFTHRLKGHRVGVPSRRG
KYLWLPLEDTHQSVLAHLGMSGQLLVQPDAAPDEKHLRIRVRFADDLATQLRFVDQRTFG
GLSLHDNTPEGLPDVIAHIARDPLDPLFDDEAFHQALRRKRTTVKRALLDQSLISGVGNI
YADEALWRARVHYERPTSGFTRPRTAELLGHVRDVMNEALAVGGTSFDSLYVNVNGESGY
FDRSLDAYGREGLPCKRCGTPMRRRPWMNRSSYFCPKCQRAPRTAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgcccgaggtcgaggtcgtccggcgcggcctggagcggtgggtcgcccac
cgtgtcgtcgccgacgccgaggtgctgcacccgcgtgccgtacggcgccatgtggccggt
gccgacgacttcacgcaccgcctcaaggggcaccgcgtcggcgtgcccagccgccgcggc
aagtatctgtggctgcccctggaggacacccaccagtcggtcctggcccacctcggcatg
agcggccagctcctggtccagccggatgcggcccccgacgagaagcacctcaggatccgc
gtccgcttcgccgacgacctcgccacgcagctgcgcttcgtcgaccaacgcaccttcggc
ggactgtcgttgcacgacaacacccccgaggggctgccggacgtcatcgcgcacatcgcc
cgcgacccgctcgacccgctcttcgacgacgaggccttccaccaggcgctgcgccgcaag
cgcaccaccgtcaaacgggctcttctggaccagtcgttgatcagcggcgtcggcaacatc
tatgcggacgaggccctttggcgcgcccgcgtccactacgagcgccccacgtccggcttc
acacgcccgcgcacggccgaactcctcggccacgtacgggacgtgatgaacgaggcgctc
gccgtcggcggcaccagcttcgacagcctctacgtcaacgtcaacggggagtcgggctac
ttcgaccggtcgctggacgcgtacggccgggaggggctgccctgcaagaggtgcggcacg
ccgatgcgccggcgcccctggatgaaccgctccagctatttctgcccgaagtgtcagcgg
gcgccgcggaccgcgtcgtaa
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