KEGG   Streptomyces spinosirectus: LXH13_28890
Entry
LXH13_28890       CDS       T08958                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sspn  Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:sspn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sspn03016]
    LXH13_28890 (truB)
Enzymes [BR:sspn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LXH13_28890 (truB)
Transfer RNA biogenesis [BR:sspn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LXH13_28890 (truB)
 Prokaryotic type
    LXH13_28890 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD DUF7158
Other DBs
NCBI-ProteinID: UIR20811
LinkDB
Position
6242768..6243673
AA seq 301 aa
MTQQNRTPDGLVVVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTIRLGQTTVTDDAEGEITGSHDASKVTREAVDARIAELTGEIMQV
PSKVSAIKIDGVRSYKRAREGEEFEIPARPVTVSSFAVHDMREAVAEDGTAVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDGARTLDQLQQELTVLPIAEAAA
AAFPRWDVDERRARLLTNGVRLDMPETYAGRGPVAVFGPEGRFLVLVEEHKGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagcagaaccggacgcccgacgggcttgtcgtcgtcgacaagccgtcgggcttc
acctcgcacgacgtggtcgccaagatgcgcggcatcgcccgcacccgccgcgtcgggcac
gcgggcaccctcgaccccatggcgacgggcgtgctcgtcctcggcgtcgagcgggccacc
aaactgctcggtcacctcgcgctgaccgagaaggagtacctgggcacgatccgcctcggg
cagacgacggtcaccgacgacgccgagggcgagatcacggggtcgcacgacgcctcgaag
gtcacccgcgaggccgtcgacgcccggatcgccgagctgaccggcgagatcatgcaggtc
ccctcgaaggtcagcgccatcaagatcgacggtgtgcgctcctacaagcgcgcccgcgag
ggcgaggagttcgagatcccggccaggccggtcaccgtctcgtccttcgcggtccacgac
atgcgcgaggcggtcgccgaggacggcaccgcggtgttggacctcgtggtgtccgtcgtc
tgctcctccggcacctacatccgggccctggcccgggacctgggtgcgggactgggcgtc
ggcggccatctcaccgcgctgcgccgcacccgcgtcggcccttacaagctggacggcgcc
cgcacgctggaccagctgcagcaggagctgaccgtgctgccgatcgccgaggccgccgcg
gccgcgttcccgcgctgggacgtggacgagcggcgggcccgtctgctcaccaacggcgta
cgcctggacatgcccgagacgtacgcgggccgcggtccggtggccgtcttcggtcccgag
gggcgcttcctcgtactcgtcgaggagcacaagggcaaggcgaagagcctggccgtcttc
ggctga

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