Streptomyces spinosirectus: LXH13_29190
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Entry
LXH13_29190 CDS
T08958
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sspn
Streptomyces spinosirectus
Pathway
sspn00300
Lysine biosynthesis
sspn00470
D-Amino acid metabolism
sspn01100
Metabolic pathways
sspn01110
Biosynthesis of secondary metabolites
sspn01120
Microbial metabolism in diverse environments
sspn01230
Biosynthesis of amino acids
Module
sspn_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LXH13_29190 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LXH13_29190 (dapF)
Enzymes [BR:
sspn01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LXH13_29190 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
UIR20862
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Position
6318256..6319125
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AA seq
289 aa
AA seq
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MSTRIAFLKGHGTENDFVIVPDPENAVDLPPAAVAALCDRRAGIGGDGLLHVVRSAAHPE
ARDMAAEAEWFMDYRNGDGSVAEMCGNGVRVFARYLQRAGYAGEGDLAIATRGGVKGVHI
DKDGDITVGMGRARLPEGDVTVSVGERNWPARNVNMGNPHAVAFVDDLAHAGHLYTPPPF
SPASAYPDGVNVEFVVDRGARHVAMRVHERGSGETRSCGTGACAVAVAAARRDGADPAVT
GTPATYTVDVPGGTLVITERTDGEIEMTGPAVIVAEGEIDGEWLEKIAQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcggatcgccttcctcaaggggcacggcacggagaacgacttcgtgatcgtc
ccggaccccgagaacgccgtcgacctgcccccggccgccgtcgccgccctgtgcgaccgc
cgcgcgggcatcggcggtgacggtctgctgcacgtcgtgcggtccgccgcgcaccccgag
gcgcgggacatggcggccgaggccgagtggttcatggactaccgcaacggcgacggctcg
gtagcggagatgtgcggcaacggcgtgcgcgtgttcgcgcgctacctccagcgcgccggg
tacgccggcgagggggacctcgcgatcgccacgcgcggtggcgtgaagggcgtgcacatc
gacaaggacggcgacatcaccgtcggcatgggcagggcgcgcctgcccgagggggacgtc
accgtgagcgtgggcgagcgcaactggcccgcgcggaacgtgaacatgggcaatccgcac
gcggtcgcgttcgtcgacgacctcgcgcacgccggccatctgtacacgcccccgccgttc
agtccggcctccgcctacccggacggtgtgaacgtcgagttcgtggtcgaccgcggcgcc
cggcacgtcgcgatgcgcgtgcacgagcgcggctccggcgagacccgctcctgcggcacg
ggcgcgtgcgcggtcgccgtggccgccgcccgccgggacggcgccgacccggccgtcacc
ggcaccccggcgacgtacaccgtcgatgtgcccgggggaacgctggtgatcaccgagcgg
accgacggcgagatcgagatgaccggtcccgcggtgatcgtcgccgagggcgagatcgac
ggcgagtggctggaaaagatcgcccagtga
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