Streptomyces spinosirectus: LXH13_29435
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Entry
LXH13_29435 CDS
T08958
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspn03032
]
LXH13_29435
03400 DNA repair and recombination proteins [BR:
sspn03400
]
LXH13_29435
Enzymes [BR:
sspn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LXH13_29435
DNA replication proteins [BR:
sspn03032
]
Prokaryotic type
DNA Topoisomerases
LXH13_29435
DNA repair and recombination proteins [BR:
sspn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LXH13_29435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
UIR20910
LinkDB
All DBs
Position
complement(6384059..6386515)
Genome browser
AA seq
818 aa
AA seq
DB search
MARRSTKTPPPDDSYEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRQAAATSLMTESIDEDTVDFAPNYDGQEQEPVALPAAFPNLLV
NGSSGIAVGMATNMPPHNLSEVVAAARHLIRHPNADLETLMKLVPGPDLPTGGRIVGLSG
IRDAYETGRGTFKIRATVEIDNVTARRKGLIVTELPFAVGPEKVIAKIKDLVGSKKIQGI
ADVKDLTDREHGLRLVIEIKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFEVVRRRSEFRRTKRRDRLHLVEGLLTALVDIDEVIRLIRSSENSAQAKE
RLMERFSLSDIQTQYILDTPLRRLTKYDRIELESEKDRLNAEIAELTRILESDPELRKLV
STELAAVAKKFGTERRTVLLETSGSPAATVPLQVADDPCRVLLSSTGLLARTANGEPFPE
DAGARRVKHDVIISAVPATARGEIGAVTSAGRLLRINVVDLPQLPETASAPNLSGGAPLA
EFVSLEGDETVVCLITLDESSPGLALGTEQGVVKRVVPDYPSNKEELEVITLKEGDRIVG
AVELRTGEEDLVFITDDAQLLRYQAAQVRPQGRPAGGMTGIKLTEGAKVISFTAVDPAAD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGAVP
AKAAQKNGTPAELPDIDPRRDGSGVSLPKTVSVVAGPV
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgactcgtacgaggagcggatcctc
gacatcgacgtcgtagacgagatgcagggctccttcctcgagtacgcgtactcggtcatc
tactcccgagccctgcccgacgcccgggacggcctcaagccggtgcaccggcgcatcgtc
taccagatgaacgagatgggactgcgccccgaccgcggctatgtgaagtgcgcccgcgtc
gtcggcgaggtcatgggcaagttgcacccgcacggcgacgcgtcgatctacgacgccctg
gtgcgcatggcccagcccttctccatgcgcgtgccgctcgtggacgggcatggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacacggagtgccggcaggcc
gccgcgaccagcctgatgacggagtcgatcgacgaggacacggtcgacttcgcgcccaac
tacgacggccaggagcaggagccggtggccctgcccgccgccttcccgaacctgctggtc
aacggctcctcgggcatcgccgtcggcatggcgacgaacatgccgccgcacaacctctcc
gaggtcgtcgcggcggcccgccacttgatccgccacccgaacgcggatctggaaaccctg
atgaagctcgtcccgggccccgacctgcccaccggcggccgcatcgtcggcctgtccggc
atccgcgacgcgtacgagacgggccgcggcaccttcaagatccgcgccacggtcgagatc
gacaacgtgaccgcccgccgcaagggcctgatcgtcaccgaactgcccttcgcggtcggc
cccgagaaggtcatcgccaagatcaaggacctggtcggctcgaagaagatccagggcatc
gccgacgtcaaggacctcaccgaccgcgagcacggcctgcgcctggtcatcgagatcaag
aacggcttcgtgccggaggccgtcctggagcagctgtacaaactgacgccgatggaggag
tccttcggcatcaacaacgtcgcgctggtggacggccagccgctgacgctcggcctcaag
gagctgctggaggtctacctcgaccaccgcttcgaggtcgtgcgccgccgcagcgagttc
cgccgcaccaagcgccgcgaccggctgcacctggtggagggcctgctgacggcgctcgtc
gacatcgacgaggtcatccgcctgatccgctccagcgagaacagcgcgcaggccaaggag
cgcctgatggagcgcttctccctgtcggacatccagacccagtacatcctggacacgccg
ctgcgccgtctgaccaagtacgaccgcatcgagctggagtcggagaaggaccggctgaac
gccgagatcgcggagctgacccggatcctcgagtcggacccggagctgcgcaagctggtc
tccaccgaactggccgcggtggccaagaagttcggcaccgagcggcgtacggtcctgctg
gagacgtccggctccccggccgccaccgtgccgctgcaggtcgcggacgacccgtgccgg
gtcctgctctcctccacgggcctgctggcccgcacggcgaacggcgagcccttcccggag
gacgccggggccaggcgcgtgaagcacgacgtgatcatctcggcggtcccggccacggct
cgcggcgagatcggcgcggtgacctccgcaggccgcctcctgcgcatcaacgtcgtggac
ctgccgcagctccccgagacggcctcggcaccgaacctctcgggcggggcgcctcttgcg
gagttcgtctccctggagggcgacgagacggtggtctgcctgatcacgctcgacgagtcc
tcccccggcctcgccctcggcacggaacagggcgtggtcaagcgtgtggtccccgactac
cccagcaacaaggaggagttggaggtcatcaccctcaaggagggcgaccggatcgtcggc
gcggtcgagctgcgcaccggtgaggaggacctggtcttcatcaccgacgacgcccaactg
ctgcgctaccaggccgcgcaggtccgcccccagggccgtcccgcgggcggcatgacgggc
atcaagctcaccgagggcgcgaaggtcatctccttcacggcggtggacccggcggccgac
gcggtcgtgttcacggtcgcgggctcgcgcggcaccctcgacgactccgtccagacgacg
gccaagctgacccccttcgaccagtatccgcgcaagggccgcgccaccggcggcgtccgc
tgccagcgcttcctcaagggtgaggactgcctctccctggcctgggcgggcgcggtaccg
gccaaggcggcccagaagaacggcactccggcggaactccctgacatcgatccacggcgc
gacggctcgggcgtgtcactgccgaagacggtgtcggtggtggcgggaccggtctag
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