Streptomyces spinosirectus: LXH13_39050
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Entry
LXH13_39050 CDS
T08958
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sspn
Streptomyces spinosirectus
Brite
KEGG Orthology (KO) [BR:
sspn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspn03000
]
LXH13_39050
Transcription factors [BR:
sspn03000
]
Prokaryotic type
Helix-turn-helix
Other families
LXH13_39050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
HTH_50
AAA_16
HTH_30
HTH_29
HTH_7
HTH_23
HTH_22
Sigma54_activat
P22_Cro
HTH_28
HTH_17
DUF815
AAA_22
TIP49
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UIR22675
LinkDB
All DBs
Position
complement(8515586..8517505)
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AA seq
639 aa
AA seq
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MEPVESVEPLEKTRPSHTVSPLGLDRPVPHLNPVRARAHFLEGENVSPSEVRPPILDSWQ
RSRFFGVDADRIQAPYNADFDPHSRLATAARPVLDRLSDALQGTPMCLILTDSKGRVRER
RTGDRALHRYLDDICLAPGFSYAEEYVGTNGIGTAAEDGRTAQVFGSEHFSERLQRVSCA
AAPIRNPVSGRVLGLVDLTSWQHTASPLMVALVREAAADIEERLLDLGSERERAALRAFL
TSRQSSRRALVTLTDGLLLADAAATEMLGPADHRRLRELATDATGLREQRMLLSDGRTVQ
LRGRRVEGDQPGGNPAAYLIELRLIAEQDESVLPRPVVRVPRLAGISGSSPVFRGAVAQL
IRHCEQGRWTLVVGEAGTGKHALVRAVHRQVAPTAPIGVHDAADARGGAAPWLQAVFRDL
AEDRGTVVLRHLDLLPAHVLGQLDGVLRTTAGRSGWVAALLTQDRPTLPGAGTDALPGAG
AAAASRQPDPVDAVRARFEAEVTVPPLRHRTADIPALVTCLISRHGGDSADVRCTDGALR
ALSRAPWPGNVRQLEGSLRYAEAHRTGPLIEDSDLPPSLLSQTQHPLSAWESTERDLIIQ
SLLDHGGDKARAAKALGISRATIYRKITAYGIRVGPENG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggaacctgtggaatccgtggaacccctggagaagacgaggccgtcgcacaccgtctcc
ccgctcggcctggaccgtcccgtcccgcacctcaatcccgtccgtgcacgcgcccatttc
ctggagggcgagaacgtctcgccctccgaagtgcgcccgcccatcctcgactcctggcag
cgctcacgcttcttcggcgtggacgccgaccgcatccaggccccgtacaacgccgacttc
gacccgcactcccggctcgccacggccgcccgtccggtcctcgaccggctctccgacgca
ctccagggcaccccgatgtgcctcatcctgaccgactccaagggacgggtgcgcgagcgc
aggaccggcgaccgggccctgcaccggtatctcgacgacatctgcctggcacccggcttc
agttacgccgaggagtacgtcggcaccaacggcatcggcaccgccgcggaggacggccgt
accgcgcaggtgttcggctcggagcacttctccgagcgcctgcaacgggtgtcgtgcgcg
gcggcgcccatccgcaatccggtcagcggacgggtgcttggtctggtcgatctgacgtcc
tggcagcacaccgcctcgcccctgatggtggcgctggtccgcgaggccgccgccgacatc
gaggagcggctgctcgacctcggatcggaacgcgaacgcgccgcgctgcgcgctttcttg
acgtcccgtcagagctcacgccgggctctggtcaccctcaccgacggtctgcttctcgcg
gacgcggccgcgacggagatgctcggcccggccgaccaccgacgactgcgggaactcgcc
accgatgcgaccgggctgcgcgagcagcggatgctcctcagcgacgggcggaccgtgcag
ctgcggggccgccgggtggagggcgaccagcccggcgggaacccggccgcatatctgatc
gaactgcggctgatcgcggagcaggacgagtccgtactgccccgccccgtggtccgggta
ccgcggctcgccggcatcagcgggtcgagccccgtgttccggggcgccgtcgcccagttg
atccgccactgcgagcagggacgctggacgctcgtggtcggggaggcgggcaccggcaag
catgcgttggtccgggccgtgcaccgccaggtcgcgcccacggcaccgatcggcgtgcac
gacgcggcggacgcgcgcggtggcgccgcgccgtggctgcaggccgtgttccgagatctc
gccgaggaccgcggcacggtcgtgctacggcatctcgatctgctccccgcgcacgttctg
gggcagctcgacggggtgctgcgcaccacggccggacgctccggctgggtggccgcactg
ctcacccaggaccggcccacgctgcccggcgcgggcaccgacgcactccccggtgccggc
gcagcggccgcgtcacggcaaccggatcccgtcgacgcggtgcgggcacggttcgaggcc
gaggtcacggtcccgccgctgcggcaccgtaccgccgacatccccgccctcgtgacctgc
ctgatcagccgccatggcggcgacagcgcggacgtccggtgcaccgacggcgcgctgcgg
gccctgtcccgggcgccgtggcctggcaacgtccgccagctcgagggctcgctccgctat
gccgaggcacaccgcaccggacccttgatcgaggattccgaccttccgccatccctgctc
tcccagacccaacacccgttgtccgcctgggagtccacggaacgcgacctgatcatccag
tcgctcctcgaccacggcggcgacaaggccagggccgcaaaagcgctgggcatctcccgg
gcgaccatctaccgcaagatcacggcgtacggcatacgggtgggaccggagaatgggtga
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