Streptomyces spongiicola: DDQ41_02945
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Entry
DDQ41_02945 CDS
T06937
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03030
DNA replication
sspo03430
Mismatch repair
sspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDQ41_02945
03430 Mismatch repair
DDQ41_02945
03440 Homologous recombination
DDQ41_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspo03032
]
DDQ41_02945
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_02945
Enzymes [BR:
sspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDQ41_02945
DNA replication proteins [BR:
sspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDQ41_02945
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDQ41_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
AWK08064
LinkDB
All DBs
Position
complement(697956..701495)
Genome browser
AA seq
1179 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSAQKA
GITPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTIWAANATGLHNLFRL
SSDAYAEGWLQKWPRMDKETISKWSEGLIASTGCPSGELQTRLRLGQFDEALKSAAEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEAGAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSTDEMYAIDASDAWQEGCRNTLLVAEQVDTAGMFEKRD
LMPRFDIPEGHTEVSWFREETMRGMHRRFPDGIPDDRMQQVEYEMDTIISMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERISMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIPLSGILDPQHPRYGEAGEIRGMYENEPDVKKVIDTARGVEGLVRQMGVHAAG
VIMSSETITDHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMNSHTNYALRKNGQQEITPIHPELEQPLTEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFTIFQAGARGNDYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAFLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
EPNFAAQGDDVILFGLTAVRNVGQNVVDSIIKCRKAKGKYATFPDFLDKVEAVVCNKRTV
ESLIKAGAFDEMGHTRKGLVAQHEPMIDNVVAVKRKEAEGQFDLFGGMSDEPGGEPGFGL
DVEFSDVEWEKSYLLAQEREMLGLYVSDHPLFGIEHVLSDKTDAAIAQLTGGEHADGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDVPRLVAMELMVPDLSSAGTNAPVVITIPTVKVTPPMVSRLGEILGHHRGNTEVRI
KLQGARKTTVLRLDRHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcctttcacgcaccttcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgacgcctgcaacgagatgggcatgacgcacatcgcc
atgagcgatcacggcaacctgcacggcgcctacgacttcttccactccgcgcagaaggcc
gggatcaccccgatcatcggcatcgaggcctatgtcgcccccgagtcgcggcggaacaag
cggaagatccagtgggggcagccgcaccagaagcgggacgacgtgtccggttccggcggt
tacacccacaagacgatctgggcggcgaacgcgacgggtctgcacaacctcttccgcctc
tcctcggacgcgtacgccgagggctggctccagaagtggccgcggatggacaaggagacg
atctccaagtggtccgagggcctgatcgcctccaccggctgcccctcgggcgagctccag
accaggctgcgcctcggccagttcgacgaggccctgaagtcggcggccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgcgtccgcgacgggctgctggagatcggccgcaagctcggcatcccgccgctggtcacc
aacgactcgcactacacgtacgcccacgaggccggcgcccatgacgcgctgctgtgcatc
cagaccggcaagaacctctcggacccggaccgcttcaagttcgacggcaccggctactac
ctgaagtcgaccgacgagatgtacgcgatcgacgcctccgacgcctggcaggagggctgc
cgcaacaccctgctggtcgcggagcaggtcgacacggccgggatgttcgagaagcgcgac
ctgatgccgaggttcgacatccccgaggggcacacggaggtctcctggttccgcgaggag
accatgcgcggcatgcaccggcgcttccccgacgggatcccggacgaccgcatgcagcag
gtcgagtacgagatggacaccatcatctcgatgggcttcccgggctacttcctcgtcgtc
gccgacttcatcatgtgggccaagaaccagggcatcgccgtcggccccggacggggttcc
gcggcgggctcgatcgtggcgtacgccatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgcgatcaaggac
tccgcccgggtgctcggctacccgtacgcgatgggcgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctctccggcatcctcgacccccagcacccgcgc
tacggcgaggccggcgagatccgcgggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgcccgcggtgtggagggactggtccggcagatgggcgtgcacgccgccggc
gtgatcatgtccagcgagaccatcaccgaccacgtcccggtgtgggtgaggcacaccgac
ggcgtcaccatcacacagtgggactacccgagctgcgagtcgctcggtttgctgaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaaggggatcgacatcgacctcctgagcctgccgctcgacgaccccacgacgttcgag
ctgctgcagcgcggcgacaccctcggcgtgttccagttcgacggcggccccatgcgctcg
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtgtcggccctctac
cggccgggcccgatgggcatgaactcgcacaccaactacgcgctgcgcaagaacggccag
caggagatcaccccgatccatcccgagctggagcagccgctcacggaggtcctggacgtc
acctacggcctgatcgtctaccaggagcaggtgcagaaggccgcccagatcatcgccggg
tactcgctcggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgaggaa
ctggcgaagaacttcacgatcttccaggcgggcgcccgcgggaacgactacagcgacgag
gcgatccaggcgctgtgggacgtgctggtccccttcgccgggtacgccttcaacaaggcc
cactccgccgcctacggcctcgtctcgtactggaccgccttcctcaaggccaaccatccg
gccgagtacatggcggccctgctcacctcggtcaaggacgacaaggacaagtccgccgtc
tatctcaacgagtgccgccgcatgggcatcaaggtcctgccgcccaacgtgaacgagtcg
gagccgaacttcgcggcccagggcgacgacgtgatcctcttcggcctcacggccgtccgg
aacgtcgggcagaacgtcgtcgactcgatcatcaagtgccgcaaggccaaggggaagtac
gccaccttcccggacttcctggacaaggtcgaggcggtcgtctgcaacaagcggaccgtc
gagtcgctcatcaaggccggcgccttcgacgagatgggccacacccgcaagggcctggtc
gcccagcacgaaccgatgatcgacaacgtggtggcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcgggatgagcgacgagccgggcggtgagccgggcttcggactc
gacgtcgagttctccgacgtggagtgggagaagtcctatctgctcgcccaggagcgggag
atgctcggcctgtacgtctccgaccacccgctcttcggtatcgagcacgtcctcagcgac
aagaccgacgcggccatcgcccagctcaccggcggtgagcacgccgacggcgcggtcgtc
accatcggcgggatcatctcgggcctccagcggaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctggcgggctccatcgagtgcatgttcttcccggcgacc
taccagctggtctccacccagctggtcgaggacacggtcgtcttcgtgaagggcaggctc
gacaagcgcgaggacgtcccgcggctggtcgcgatggagctgatggtccccgacctgtcg
tcggcgggcaccaacgcacccgtggtgatcaccattccgacggtgaaggtcaccccgccc
atggtcagccggctcggcgagatcctcggccaccaccggggcaacacggaggtgcggatc
aagctccagggcgcccgcaagaccaccgtgctccgtctcgaccggcaccgggtccagccc
gatcccgcactgttcggcgacctgaaggtgctgctcggcccgtcctgcctggccggctga
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