Streptomyces spongiicola: DDQ41_05590
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Entry
DDQ41_05590 CDS
T06937
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03030
DNA replication
sspo03430
Mismatch repair
sspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDQ41_05590
03430 Mismatch repair
DDQ41_05590
03440 Homologous recombination
DDQ41_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspo03032
]
DDQ41_05590
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_05590
Enzymes [BR:
sspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDQ41_05590
DNA replication proteins [BR:
sspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDQ41_05590
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDQ41_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DEDDh_C
RhoGAP
Motif
Other DBs
NCBI-ProteinID:
AWK08490
UniProt:
A0ABN5KIP4
LinkDB
All DBs
Position
1295233..1296216
Genome browser
AA seq
327 aa
AA seq
DB search
MTMLDDRTTAPAWPAAYPQGYAVVDVETTGLARDDRIVSAAVYRLDAQGNVEDHWYSLVN
PERDPGPVWIHGLTSGMLEGAPLFGDIAHEFAHRLDGRVLVAHNAVFDWSMIAREYARAE
HLAPVRQRLCTIALSKELSLPLPNHRLESLAAHFGVVQRHAHNALDDARVLAEVFRPSLH
TAAARGVRLPLLECRPLTEWSTAPSAPRIGRQAPGASYRPNGWRPSRRRPPCPYPNPGRY
TSGKPLKQGMRVAFSGDTSIERELLEDRAVEAGLHVATSVSRLTSLLVTNDPDAPTSKTA
RARSYGTPIVDEAAFTHLLRDVAPAEE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatgctcgacgaccgtacgacagcaccggcgtggccggccgcgtatccacagggg
tacgcggtcgtcgacgtggagaccaccggcctcgcccgtgacgaccggatagtgtcggct
gccgtctaccgcctggacgcgcaggggaacgtcgaggaccactggtattccctggtcaac
cccgagcgggaccccggcccggtgtggatccacgggctgacgagcggcatgctggagggt
gcgccgctcttcggcgacatcgcccacgagttcgcgcaccggctggacggccgggtgctc
gtcgcgcacaacgccgtcttcgactggtccatgatcgccagggagtacgcacgggccgag
cacctcgcgcccgtgcgccagcggctgtgcaccatcgcgctgtccaaggagctgtcgctg
ccgctgcccaaccacaggctggagtcgctcgcggcgcacttcggcgtggtccagcgccat
gcgcacaacgccctggacgacgcccgggtgctggcggaggtgttccgcccgagtctgcac
accgcggccgcgcggggtgtgcggctgccgctgctggagtgccgcccgctcaccgagtgg
tccacggctccgtcggcgccgcggatcggccggcaggcgccgggcgcctcgtaccgtccg
aacggctggcgcccgtcgcgcaggcggcccccgtgcccgtacccgaacccgggacgttac
acatcgggcaaaccgctcaaacagggcatgcgggtagccttttcgggcgacacctcgatc
gagcgggagctcctggaggaccgtgccgtggaggccggcctccatgtcgcgaccagtgtc
tcccggctgaccagcctcctggtcaccaacgatccggacgcgcccacctcgaagacggcc
agagccaggtcgtacgggacaccgatcgtcgacgaggccgcgttcacccacctgctcagg
gacgtggcaccggccgaggagtga
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