Streptomyces spongiicola: DDQ41_06220
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Entry
DDQ41_06220 CDS
T06937
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DDQ41_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_06220
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DDQ41_06220
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DDQ41_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AWK08586
UniProt:
A0ABM6V3K9
LinkDB
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Position
complement(1428810..1429619)
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AA seq
269 aa
AA seq
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MTLFRDDGIVLRTQKLGEADRIITILTRGHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSDLVGRGLPLCTQSETIAPYGSGIVTDYARYTSGTAMLETAERFTDHEGEPSVQQ
YLLLVGGLRALARGEHPPHLVLDAFLLRSLAVNGYAPSFSDCARCGMPGPNRFFSAAAGG
VVCGDCRVPGSVVPSAEAIGLLGALLTGDWDTAEACEARHVREGSGLVSAYLHWHLERGL
RSLRYVEKHADKHADKHADKHADKHAEKK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgttccgcgacgacggcatcgtgctgcgcacgcagaagctgggcgaggcggac
cgcatcatcacgatcctcacccgcggacacgggcgggtccgcgccgtcgcccgcggagta
cgccgcaccaagtcgaagttcggcgcccgcctcgaaccgttctcgcacgtcgacgtgcag
ttcttcgcccgaggcagcgacctcgtcggccgcggcctgccgctgtgcacccagagcgag
accatcgccccgtacggcagcggcatcgtcaccgactacgcccgctacacctcgggcacc
gccatgctggagaccgcggagcgcttcaccgaccacgagggcgagccgtccgtccagcag
tacctgctgctggtcggcgggctccgcgccctcgcccgcggagagcacccgccgcacctc
gtcctcgacgcgttcctgctgcgttccctcgccgtgaacggctacgcgccgtcgttctcc
gactgcgcgcgatgcggcatgcccgggccgaaccggttcttctccgccgccgcgggcgga
gtcgtctgcggcgactgccgcgtacccggcagcgtcgtaccctctgccgaggcgatcggc
ctgctcggcgcgctgctgaccggggactgggacaccgcggaggcgtgcgaggcgcgccac
gtcagggaaggcagcggactggtgtccgcctatctgcactggcacctggagcgcggcctg
cgctcgctgcggtacgtggagaagcacgccgacaagcacgccgacaagcacgccgacaag
cacgccgacaagcacgccgagaagaagtga
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