Streptomyces spongiicola: DDQ41_06405
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Entry
DDQ41_06405 CDS
T06937
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03030
DNA replication
sspo03430
Mismatch repair
sspo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DDQ41_06405 (holA)
03430 Mismatch repair
DDQ41_06405 (holA)
03440 Homologous recombination
DDQ41_06405 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspo03032
]
DDQ41_06405 (holA)
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_06405 (holA)
Enzymes [BR:
sspo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DDQ41_06405 (holA)
DNA replication proteins [BR:
sspo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DDQ41_06405 (holA)
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DDQ41_06405 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
Motif
Other DBs
NCBI-ProteinID:
AWK08615
UniProt:
A0ABM6V3Z0
LinkDB
All DBs
Position
complement(1469466..1470452)
Genome browser
AA seq
328 aa
AA seq
DB search
MATRKNTDDDPLAPVTIAVGQEDLLLDRAVQQVVAASRAADADTDVRDLTPDQLQPGTLA
ELTSPSLFAERKVVVVRSAQDLSADTVKDVKAHLSAPVDEITLVLLHAGGAKGKGLLDAA
RKAGAREVACPKTTKPAERLNFVRSEFRTLGRSATPEACQALVDAIGSDLRELASAVSQL
VADVEGTVDEAVVGRYHTGRAEASSFTVADRAVEGRAAEALEALRWSLSTGVAPVLITSA
LAQGVRAIGKLSSARGGRPADLARELGMPPWKIDRVRQQMRGWTPDGVALALRAVAEADA
GVKGGGDDPEYALEKAVVTIARAARLRR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggaagaacaccgacgacgaccccctcgcccccgtcacgatcgcggtgggc
caggaggatctgctgcttgaccgtgccgtgcagcaggtggtggcggcctcccgggccgcc
gacgccgacacggacgtccgggatctcacccccgaccaactccagcccggcacgctcgcc
gagctgacgagcccctcgctcttcgccgaacgcaaggtcgtcgtcgtccggagcgcgcag
gacctctccgcggacacggtcaaggacgtcaaggcccacctctccgcaccggtcgacgag
atcacgctggttctgctgcacgcgggcggcgcgaaggggaagggactgctcgacgcggca
cgcaaggcgggcgcgcgcgaggtggcctgccccaagacgacgaagccggccgagcgactg
aacttcgtgcgctccgagttccgcacgctgggacggtccgcgacccccgaggcatgccag
gccctcgtcgacgccatcggcagcgacctccgggagctggcgagcgccgtctcgcaactg
gtcgcggatgtcgagggcacggtcgacgaggccgtcgtcggccgctaccacaccggtcgt
gcggaggcgtccagcttcaccgtggccgatcgagcggtcgagggacgtgcggctgaggcg
ctggaggcactgcgctggtcgctgtcgaccggtgtcgcgcccgtcctcatcaccagcgcg
ctggcgcagggggtacgggcgatcggcaagctgtcgtcggcccgtggcggccgcccggcg
gatctcgcgcgcgaactcggcatgccgccgtggaagatcgaccgtgtccgccagcagatg
cgcggctggacgccggacggcgtggccctcgccctgcgcgccgtggcggaggcggacgcc
ggggtgaagggaggcggtgacgacccggagtacgcgttggagaaggcggtggtgacgatc
gcccgcgcggcccgcctgcgccgctga
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integrated database retrieval system
