Streptomyces spongiicola: DDQ41_08275
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Entry
DDQ41_08275 CDS
T06937
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspo03032
]
DDQ41_08275
03036 Chromosome and associated proteins [BR:
sspo03036
]
DDQ41_08275
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_08275
DNA replication proteins [BR:
sspo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DDQ41_08275
Chromosome and associated proteins [BR:
sspo03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DDQ41_08275
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DDQ41_08275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Urease_beta
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AWK12791
UniProt:
A0A2S1Z8Y8
LinkDB
All DBs
Position
complement(1906380..1906661)
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AA seq
93 aa
AA seq
DB search
MNRSELVAALADRAEVTRKDADAVLAAFAEVVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGDPIQIPAGYSVKVSAGSKLKEAAKGK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcagtgagctggtggccgcgctggccgaccgtgccgaggtgacccgcaaggac
gccgacgctgtgctggccgccttcgcagaggtcgtcggcgagatcgtcgccaagggcgac
gagaaggtcaccatccccggtttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gctcgcaacccgcagaccggcgacccgatccagatcccggccggctacagcgtgaaggtc
tccgcgggctccaagctcaaggaagccgcgaagggcaagtaa
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