Streptomyces spongiicola: DDQ41_10650
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Entry
DDQ41_10650 CDS
T06937
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_10650
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DDQ41_10650
Archaeal homologous recombinant proteins
DDQ41_10650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
Peptidase_M3_N
AAA_22
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AWK09304
UniProt:
A0ABN5KLI0
LinkDB
All DBs
Position
complement(2467164..2470637)
Genome browser
AA seq
1157 aa
AA seq
DB search
MRLHRLEITAFGPFATRQQIDFDTLSAAGLFLLHGPTGAGKTSVLDAVCYALYGAVPGDR
QGPGTSLRSDHAPAGTCTEVCLDLTAGGRRLEITRRPAQPRPKKKGTGVTTEKAQSRLRE
YDAARGEWTALSRSHQEIGDEIAQLVGMSRDQFCQVVLLPQGEFARFLRADAEARGKLLG
RLFDTRRFALVEARLAELRRAAEQQVRDGDERLLALAHRMGQAAGNAAGAWPAPTHRPGD
PGLADAVLQWAAVARADARESLAVAASARSAARTRQSAARHELDAERELAALQRRHDDAV
RRAGELAERRPATERARARLEQARRAELVGPALRLREDAEREHDSADAAARRVRAALPAA
LADTGAERLSELEHELRQELGGLDAARRAELRSAGIARELGELDRQSRDDDVILRDAEGW
LADWDTVRRSLQDRIEAAQEAATRAEHLAGRLEPARRRVTAARDRDGLAARADAVEHDRR
SAGERAGAAREQWLDLKERRLLGIAAELAAGLAPGEPCAVCGATEHPAPARPGQAHVDRA
AEDAAYEEYAAADRARAEAERELAVLRGAFTAAREAARESAPEVPGDGGGRRASSFVSEP
GVPSSFVSEPGVPSSFVSEPGVPSSSVPEPGVPSSFVSEPGVPSSFVSEPGVPSPSVPSP
SAAPDDLRGGEAADGAGEPTGPGARGTQAPAGGAAEVRRDPAAAPDPTAVGGSPRAVAVA
EHSGGGTADAAPADPALTALEEVVARLEREHRQAHALAAGTHDAREALDRAEREHGERLA
ARQEAERRAVARTSRREALESEQTVLDAEVARAVGGSGTVADRTALLERRIALLHEAAEA
VRAADTAARRLKEADDRLSDAAFRAGYGTPADAATALLDDAGQRDLQRRLDAWQAEEAAV
ADRLAEPGPRAAAAGPPARPEAALRVFDAAESALRDAVSALDSARERCAELDRLSRLAAA
EARRLGPLRDDYERVARLAGLTAGTSADNERRMRLESYVLAGRLEQVAAAATVRLRRMSA
GRYTLVHSDARSGGKRSGLGLHVVDAWTGRERDTATLSGGETFFVSLALALGLADVVTDE
AGGARLDTLFIDEGFGSLDDQTLDEVLDVLDSLRERDRSVGIVSHVADLRRRIPARLEVV
KERDGSAVRLRSSPVGG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
gtgagactgcaccggctggagatcaccgccttcggtcccttcgccacacggcagcagatc
gacttcgacacgctgtccgccgctggcctcttcctgctgcacggaccgacgggggcgggc
aagacgtccgtcctcgacgccgtctgctacgccctgtacggcgcggtgcccggcgaccgg
cagggccccggtacctccctgcgcagcgaccacgcccccgccggcacctgcaccgaggtg
tgcctggacctgaccgcgggcggccgccgactggagatcacccgccgtcccgcacagccc
cgccccaagaagaagggcacgggcgtcaccaccgagaaggcgcagagccgacttcgggag
tacgacgccgcgcgcggcgagtggaccgcactcagccgctcccaccaggagatcggcgac
gagatcgcccagctcgtcggcatgagccgggaccagttctgccaggtcgtcctgctgccg
cagggcgagttcgcgcgctttctgcgggcggacgccgaagcacgcggaaagctgctcggc
aggctcttcgacacccgccggttcgccctggtcgaggcacgcctcgccgaactgcgccgc
gccgccgagcagcaggtgcgggacggcgacgagcgactgctggccctggcccaccggatg
ggccaggcggccgggaacgcggccggcgcctggcccgcccccacccaccggccgggagac
cccggcctcgccgacgcggtgctgcagtgggccgccgtggcccgcgcggacgcccgggaa
tccctcgccgtcgccgcctcggcccggtccgcggcccggacccgccagtccgccgcccgg
cacgagctggacgcggaacgggaactggccgcactccagcggcgccacgacgacgccgta
cggcgggccggggaactggcggagcggcggcccgcgacggaacgcgcacgagcacgcctg
gagcaggcccgccgggccgaactggtcggtccggcgctgcggttgcgcgaggacgccgaa
cgggagcacgactcggccgacgccgccgcccggcgggtccgggccgccctccccgcggca
ctggccgacacgggagcggagcggctctccgaactggagcacgaactccggcaggaactg
ggcggcctggacgccgcgcgccgcgccgaactgcgcagcgccggcatcgcccgcgaactc
ggcgaactcgaccggcagtcccgcgatgacgacgtgatcctccgggacgcggagggctgg
ctcgccgactgggacacggtgcgccgctcgctacaggaccggatcgaggccgcgcaggag
gccgcgacccgcgccgaacacctcgcgggacggctggaaccggcccgccgccgggtgacc
gccgcccgtgaccgcgacgggctggccgccagggccgatgccgtcgagcacgaccgacgc
agcgcgggcgagcgggccggcgcggcccgtgagcagtggctcgacctcaaggagcgccgg
ctcctcggcatcgccgccgaactcgccgccgggctcgcccccggcgaaccctgtgccgtc
tgcggcgccacggagcaccccgcaccggcgaggccgggccaggcccatgtcgaccgcgcg
gcggaggacgccgcctatgaggagtacgccgccgccgaccgcgcccgcgccgaggccgaa
cgggaactggccgtgctgcggggggcgttcacggctgcgagggaggcggcgcgcgagtcg
gcccccgaggtcccgggtgacggtggaggccggcgtgcgtcgtcgttcgtgtccgagccg
ggtgttccgtcgtcgttcgtgtccgagccgggtgttccgtcgtcgttcgtgtccgagccg
ggtgtcccgtcgtcgtccgtgcctgagccgggtgttccgtcgtcgttcgtgtccgagccg
ggtgttccgtcgtcgttcgtgtccgagccgggagttccgtcgccgtccgtgccgtcaccg
tccgcggcgcccgacgacctgcgcggcggagaggcggcggacggcgccggtgagccgacg
ggcccgggcgctcggggaactcaggcaccggccggcggcgccgcggaggtccggcgggac
cccgccgccgccccggaccccaccgcggtgggcgggtccccccgtgccgtggccgtcgcc
gagcactcaggcggcggcacggcggacgccgcgcccgccgaccccgccctcacggccctg
gaggaggtcgtggcccggctggagcgcgagcaccggcaagcccacgcgctggcggccggg
acgcacgacgcccgcgaggcactggaccgggccgagcgggagcacggcgagcggctggcg
gcgcggcaggaggccgaacggcgggccgtcgcgcggacgtcgcggcgggaggccctcgag
agcgagcagaccgtgctggacgcggaggtggcgcgggccgtcggcggcagcggcaccgtc
gccgatcggaccgcgctgctggagcggcgcatcgccctgctccacgaggccgcggaggcc
gtccgcgcggcggacaccgcggcgcgccgtctgaaggaagccgacgaccggctctccgac
gcggcgttccgggccgggtacggcaccccggccgacgcggccaccgcgctgctggacgac
gccggacagcgcgaccttcagcggcggctcgacgcctggcaggccgaggaggccgcggtg
gccgaccgcctcgccgaaccgggaccccgcgcggccgcagccggcccgcccgcccggccc
gaggcggcgctgcgcgtcttcgacgccgccgagagcgcactgcgcgacgcggtctcggcg
ctcgactccgcccgggaacgctgtgcggaactcgaccggctgtcgcgtctggccgcggcc
gaggcacgccgcctcggcccgctgcgcgacgactacgagcgcgtcgcccggctcgccggc
ctcaccgcgggcacctccgccgacaacgagcgcaggatgcgcctggagtcgtacgtcctg
gcgggccggctggagcaggtcgccgcggcggccaccgtacggctccggcgcatgtccgcg
ggccgctacacgctggtccactccgacgcccgttccggcggcaagcgctccggactcggt
ctgcacgtcgtcgacgcgtggaccggcagggagcgggacacggcgacgctgtccggcggg
gagaccttcttcgtctcgctcgcgctcgccctgggcctcgccgacgtcgtcaccgacgag
gccggcggcgcgcggctggacaccctgttcatcgacgagggcttcggcagcctcgacgac
cagaccctcgacgaggtgctcgacgtcctcgactcgctccgggaacgcgaccgcagcgtg
ggcatcgtcagccatgtcgccgacctgcgccgccggatccccgcccggctcgaggtggtc
aaggagcgcgacggttcggccgtgcggctgcggtcgtccccggtcggcggctga
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