Streptomyces spongiicola: DDQ41_12440
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Entry
DDQ41_12440 CDS
T06937
Name
(GenBank) phage tail tape measure protein
Organism
sspo
Streptomyces spongiicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhageMin_Tail
EspA_EspE
Motif
Other DBs
NCBI-ProteinID:
AWK09595
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All DBs
Position
2863491..2868557
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AA seq
1688 aa
AA seq
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MATYNLTVQLTAQANSLISGLRSAADAARDLGRRTRDLDRRLAALDTSSRRTARQVDLLG
ARAQATASRLGTLGARGGQTGDRLRRAGSDAGALERSLKGAGRQAGALSRLLAGGALFLG
TGQLVEEGNRYQRQMNTFQAVTGATAGQMQRAAWMANQLGNDLTLPTTTAADAAEAMVEL
AKAGFRTDQAISATRASLQLASAAGVNAADSARYLGDIMDQFGLGADQAARASDILAATA
NNASGGIIDIYYAMRYAGPVAAGLGVSMEDAASAVGMLGKAGILGQTAGTALRGMMANLA
APTKDMRRGLKALGIEAWDTQGRFKGLRYVIEELSRAQHEMSQQDFTAAVKRAMGKPAMS
GAIALAHQGTESFDALNLAVRETGAAAQITAARGQGLAGAMTLLRKQTRQTGLALYDAMA
PGLEYVTRLMTQGLSSATPYLVTAIEYGRDLATLYGPELKQRARQGLGGLIDEAEQLLGP
LKEIGEDALASGLNLLINAGRALGDVLDNLARGAEPIADALGSLADDSGGAANALDILVT
AANLALSAVAGLSAVLVPVGQVVGTLVRAFAALPGPVQSAIAAMFLARRVAPMLGTLAST
VGGRLTSSWQSFNGQMRLQQSLAAMSGASIGRLGAAFGVLQARIPIVGQMGAAFRSAQGP
AAGFTGTLTGMARAAGVGLRGAMSGLVGFMGGPWGVALVGVTLGLGLLASHQEKAARAAA
EHEQRVSTLTDALRESGGVIDDNVRRAAAQTLLDTKVREGKDKLIDVMERAGVSMSRLTD
VYLGQGQSLESLQAELNATAETNVKWLATQGGAAKAYTDTGLKAAQAADALAEVKGEMAE
SIKNAKRLADASSDTKGGVSAYDRLKTSVGALADKTADADTRTRALKDALDLLSGGSISL
QAAEARVNSAILNVNEALDDGIDKADGFGKADGFGKALLNNNGTLNTTTRNGQQLYQSLT
SLSDAAAEATVSAYALAQQNGASLPESLAAAREQMDKARTAAVKAAQGYGLTREQAEAVA
DSLGLLPSKVSLLLETEGMDSTLADLLAVQAEFDRLPKATTIRVDSLSEDAQKKLKDLGF
TVKTVPGTREIKITAPTKGARGTLKALIDQLGTVPGSKNVKVSAATQEALASLQAMRDKL
RTTPNAKTVTISAPTAAARQELEDLGFKIRTLPDGKAEVMVPTQPPLTSVGTIQGAINSI
YGRNVGVGVFLKATSWDQDANGIPDSIQARADGAVVDYFANGGVRRENHVAQIAPAGSWR
VWAEPETQGEAYVPLAASKRPRSKAIVEEVVRRFGGDVTWYAAGGLSGWSYAPSGGGSEL
VSVSSIRSDSMRTVKRKGKEVEVFDLSRFEKNLDKAVRRTERWRKDLRTVARRAGQDVAD
ALDAMGEDGIELTHKMATGSSKYLKEMASDLQRLGLVAKATLGDFTAQLRQAVKDQSAFE
QNLAKLAALGYGDLAVRLAEQGDEAAEKLAAEAVKNPKRARQANDVARAAARTLAAEGLT
DLLTIISAIRTSTTGIHKVADRTGLEEDRIIEVANRAQSRIRSALGARATRFLSDLAKAN
KGLAYANGGIWEPGVYSSPTALIKFAEASTGGEAFIPLAPAKRAAATAVLTDVAQRFGLQ
LAPAEPTSVPVSTVDARPPGTVQVVVVRERQPLIGTMPVSVTSAQATPQQIGAEVMRRLR
NAQRGGRL
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtacaacctcaccgtacagctgacagcgcaggccaacagcctgatctccggc
ctacgttcggccgccgacgccgcccgcgacctgggccgtcgcacccgcgacctcgaccgc
cgcctcgccgccctcgacacgtccagccgacgtaccgcccggcaggtcgacctcctcggc
gcgcgtgcccaggccaccgcctcccgcctcggcaccctcggcgcccggggtggccagacg
ggcgaccgcctgcgccgcgcgggcagcgacgccggcgctctggagcgctccctcaagggc
gcgggccgacaggcgggcgcgctcagccgcctcctcgccggaggggcgctcttcctcggc
acaggccagctcgtcgaggagggcaaccgctaccagcggcagatgaacaccttccaagcg
gtgaccggcgccaccgccgggcagatgcagcgcgccgcctggatggccaaccaactcggc
aacgacctcaccctgccgaccaccactgcggccgatgccgccgaggcgatggtcgagctg
gcgaaggcgggcttccgtaccgaccaggccatctccgcaacccgcgcctcgctccagctc
gcctccgccgccggggtcaacgccgccgactcggcccgctacctcggcgacatcatggac
cagttcggtctcggcgccgaccaggccgcccgcgcctccgacattctggctgccaccgcg
aacaacgcctccggcggcatcatcgacatctactacgccatgcggtatgccggtccggtc
gccgccggcctcggcgtgagcatggaggacgccgcctccgccgtcggcatgctcggcaag
gccggcatcctcggccagaccgctggcaccgcgctgcgcggcatgatggccaacctcgcc
gcgcccacgaaggacatgcgcaggggtttgaaggccctcggcatcgaggcgtgggacacg
cagggccggttcaagggactgcggtacgtcatcgaggagctgagccgcgcccagcacgag
atgtcgcagcaggacttcaccgccgcggtgaagagggcgatgggcaagcccgccatgtcc
ggcgccatcgcgctcgcccaccagggcaccgagtccttcgacgcgctcaacctcgccgta
cgcgagacgggcgcggccgcgcagatcaccgccgcccgcggccagggcctggcgggcgcg
atgacgctgctgcggaagcagacgcggcagaccggcctcgcgctgtacgacgcgatggca
ccgggcctggagtacgtgacccggctcatgacgcagggcctgtcatccgcgacgccgtac
ctcgtcaccgccatcgagtacgggcgcgacctggcgaccctctacggccccgagctcaag
cagcgggcccgccagggcctcggtggcctgatcgacgaggcggagcagctcctcggcccg
ctgaaggagatcggtgaggacgctctcgcgtccgggctgaacctgctgatcaatgcgggc
cgcgcgctcggggacgtactggacaacctcgcccggggcgcggagcccatcgcggacgcc
ctcgggtcgctcgcggacgactccgggggcgcggcgaacgccctggacatcctcgtcacc
gccgcgaacctcgccttgtccgccgtggccggcctgtcggccgtactggtgccggtgggg
caggtcgtcggaactctggtgcgcgcgttcgccgcgctgcccgggccggtgcagagcgcg
atcgcggcgatgttcctggccaggcgggtcgcgcccatgctgggcacgctcgcctcgacc
gtgggcgggcggctcaccagctcgtggcagagcttcaacgggcagatgcggctccagcag
agcctcgccgccatgagcggcgcgagtatcggcaggctcggcgcggccttcggggtcctc
caggcccgcatcccgatcgtcggccagatgggcgccgcttttcgcagcgcccagggcccg
gcagccgggttcaccggcacgctcaccggcatggcccgcgcggccggtgtcgggctgcgg
ggtgcgatgtccgggctggtcgggttcatgggcgggccatggggcgtggcgctggtcggc
gtcaccctcgggctcgggctcctcgcctcgcaccaggagaaggccgcccgcgcggccgcc
gagcacgagcagcgggtgagcacgctgaccgacgcgttgcgtgagtccggcggcgtcatc
gacgacaacgtacgccgggccgcagcccagacgctgctggacaccaaggtccgcgaaggc
aaggacaagctcatcgacgtcatggaacgtgccggcgtctccatgagccggctcaccgac
gtctacctcggccaaggtcaatcgctggaaagcctccaagcggagctgaacgcgacggcc
gagacgaacgtcaagtggctcgcgacacagggcggcgccgccaaggcgtacaccgacacc
gggctcaaggccgcgcaggccgctgacgcgctcgccgaggtcaagggcgagatggcggag
agcatcaagaacgccaagcgcctcgccgacgccagcagcgacacaaagggcggtgtgagc
gcgtacgaccggctcaagacctccgtcggcgcgctcgccgacaagacagcggacgccgac
acccgcacccgcgcgctcaaggacgccctcgatctgctctccggcggcagcatctccctc
caggccgccgaggcgcgcgtcaacagcgccatcctcaacgtgaacgaggccctggacgac
ggaatcgacaaggccgacggcttcggcaaggccgacggcttcggcaaggccctgctgaac
aacaacggcacgctgaacaccacgacccgcaacggccagcagctctaccagtccctcacg
tccctgagcgacgccgccgccgaagccaccgtctcggcgtacgccctcgcccagcagaac
ggcgcgtcgctgcccgagtcgctggccgccgcccgcgagcagatggacaaggcgcgcacg
gccgcggtcaaggccgcccagggatacgggctgacgcgtgagcaggcggaagcggtcgcg
gacagcctcggcctgctgccgtcgaaggtgtcgctgctgttggagaccgagggcatggac
tccacgctcgcggatctcctggccgtgcaggccgagttcgaccggctgccgaaggcgacc
acgatccgcgtggactcgctcagcgaggacgcccagaagaagctgaaggacctcggcttc
accgtgaagaccgtccccggcacccgggaaatcaagatcacggctcccacgaagggcgcc
cgcggcaccctgaaggcgctcatcgaccagctcggtacggtccccggcagcaagaacgtc
aaggtcagcgccgccacacaggaggctctcgcatccctgcaggcgatgcgggacaagctg
cgcaccacgcccaacgcgaagacggtcacgatcagcgcgcccaccgccgccgcacgtcag
gagctggaggacctcggcttcaagatccgcaccctgccggacggcaaggccgaagtcatg
gtgccgacgcagccgcccctcacctcggtcggcacgattcagggtgcgatcaacagcatc
tacggacggaacgtcggcgtcggcgttttcctcaaggccacctcgtgggaccaggacgcc
aacggcatccccgactccatccaggcccgcgccgacggcgccgtcgtcgactacttcgcg
aacggaggggtgcgccgcgagaaccacgtcgcgcagatcgccccggccggctcctggcgg
gtgtgggccgagccggagacccagggcgaggcgtacgtaccgctcgccgcgagcaagcgc
ccccgcagcaaggcgatcgtcgaggaggtcgtccggcgcttcggcggcgacgtcacctgg
tacgcggccggcggcctgtccggctggtcctacgccccctccggcggcgggagcgagctc
gtgtcggtgtcgtcgatccggtcggactccatgcgcaccgtgaagcggaagggcaaggag
gtcgaggtcttcgacctgtcgaggttcgagaagaacctcgacaaggcggtgcgacggacc
gagcggtggcgcaaggacctgcgcaccgtcgcccggcgcgctggccaggacgtggccgac
gcgctcgacgccatgggcgaggacggcatcgagctgacccacaagatggccaccggctcg
tcgaagtacctcaaggagatggcctccgacctccagcggctgggcctggtcgcgaaggcg
accctcggcgacttcaccgcccagctccgccaggccgtgaaggaccagagcgccttcgag
cagaacctggccaagctcgccgccctcggctacggcgacctcgccgtgcgactcgccgaa
caaggcgacgaggcagcggagaagctggccgccgaggccgtgaagaacccgaagagggcg
cggcaggccaacgacgtggcgagggcggccgccaggaccctcgcggccgagggcctcacc
gacctgctgaccatcatcagcgcgatcaggacgagcaccaccggcatccacaaggtcgcc
gacaggaccggcctggaggaggaccggatcatcgaggtcgccaaccgcgcccagtcccgc
atcaggtccgccctcggcgcccgcgcgaccaggttcctctccgacctcgcgaaggccaac
aagggcctggcgtacgcgaacggcggcatctgggagcccggcgtctactcctcgcccacc
gcactgatcaagttcgcggaggcgagcacgggcggcgaggcgttcatcccgctcgcgccg
gccaagcgcgcggcggccacggccgtactcaccgacgtcgcccagcgcttcgggctccag
ctcgccccggccgaaccaacctccgtgcccgtaagcacagtcgacgcccgcccgcccgga
accgtccaggtcgtcgtcgtacgcgagcggcagccgctgatcggcaccatgccggtcagc
gtcacctcggcgcaggccactccacagcagatcggcgccgaggtcatgcgccgcctccgc
aacgcccagagaggaggccgactgtga
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