Streptomyces spongiicola: DDQ41_12620
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Entry
DDQ41_12620 CDS
T06937
Name
(GenBank) ATP-dependent endonuclease
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
DDQ41_12620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
OLD-like_TOPRIM
AAA_21
AAA_23
SMC_N
AAA_29
ABC_tran
DUF2813
RsgA_GTPase
DUF3226
AAA_16
AAA_27
VapE-like_dom
AAA_22
DUF3584
Motif
Other DBs
NCBI-ProteinID:
AWK09628
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Position
2896249..2898150
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AA seq
633 aa
AA seq
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MRMIRARIENFRCLQLAEVRFDNVTSIIGPNGVGKSTILRALDWFFNGEKGTSLSVDDLC
VNAKGSRILVEVEFDSLTPDDRNELGYYAPEGVDSVLIRRTWQNGEDKITGKGLTFPPFE
LVRSQLSATTKRKAYNTLREERPELSLPSAGSEALVDEAMIVWERNHPDQLEESEIQATN
FFGFAGKGKLSSLFEFILVSADLRALEESTDTRSAIFGRIIERAVDRRVADTELAELDAR
LNLERAQISTKNFGPQLELISKELTKAVEVFSAGRDVLVSPVESSHKPVKASFKVSILDG
PVETGVERQGHGFQRAMIIAALKLLSDRGSEGPRSKAVCLAIEEPELYQHPVQARAFSQV
LRKIAEDPNQRAQVAYATHNPIFVDPHHFHEIRRISRVGKGSFERAISIAHVRVEDVLEA
LSGFVPEDRVRKQIGAAILHRLAEALFASAVVLVEGDTDKAVLEGCATRSGCPLAVEGIH
VADAGNKTAIYLNHAILNLLGIPCFVVFDADSGVGVRMEQKGRTQRDIWNAEISERTENH
RLFLYLGHHNKPDWPPTHAESDFAVFADRLEELISNEWPEWGVKINELIESGLGYSEKNS
YTYARASIEAEGEPPIVIKQIIENVKAMAREGQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgatccgggcgcggattgagaacttccgctgcctccagctagctgaagtgcgc
ttcgacaacgtcacttcaattatcggccccaacggtgtcggcaagtccacgatcttgcgt
gcactcgattggtttttcaatggcgaaaagggcacgagcctaagcgtcgacgacctctgc
gttaacgctaaaggcagcaggatcctcgtcgaggtcgaattcgattcgcttacgccagac
gatcgcaatgaactcgggtactacgcccccgaaggggtggatagtgtactgattcggcgc
acatggcaaaacggcgaagataagatcacgggcaaggggctgaccttccctccgttcgag
ttggtccggagccagcttagcgcgaccacgaagcgtaaagcttacaacacacttcgcgag
gagcgtcccgaactttctcttccttctgccggaagcgaagctctagtagacgaagcgatg
atcgtctgggagagaaaccatcccgaccaactcgaagagtccgagatccaagctacaaac
tttttcgggttcgccgggaaaggcaaactatccagcctctttgagtttatcttggttagc
gcagatctgcgcgcccttgaggagtcgactgacactcgctctgcaattttcggccgaatt
atcgagcgcgccgtagacaggcgagtcgcggatacagagctagcggaactggacgctcgc
ctgaatcttgagcgtgcccagatttcgacaaaaaacttcggcccacagcttgagctgatt
tccaaggaactaaccaaagccgtggaggttttctctgctggccgagacgtccttgtctct
cctgtggaaagctcacacaagcccgttaaagcatcattcaaggtcagtattttagacggc
cctgttgagactggcgtcgagcgtcaagggcatggatttcagcgagcgatgattatcgct
gccctgaagctcctttcggatagaggtagcgaggggcctcgctccaaggctgtgtgcctg
gccatcgaagaacccgagctataccagcaccctgttcaagcgcgcgccttctctcaagtt
ttgcgaaaaatcgcagaagaccctaaccagagagcccaggtggcctacgccactcacaac
ccaattttcgtggatcctcatcatttccatgagattcggcgcataagtagagtcggtaag
gggagcttcgagcgggccatctcaatcgcacatgtccgagtcgaggacgtattagaagca
ctctccggcttcgttccggaagaccgtgtgagaaaacagatcggtgcagctattctccac
cgtctggccgaggctctatttgcatccgctgtagtactcgtagaaggcgacacagataag
gccgtgctggaaggatgcgctacgcgcagcggctgccctttggccgtcgaagggattcac
gtagcggacgccggcaacaagacggcgatttacttgaatcacgcaattctgaatctactc
ggcattccatgctttgtagtatttgacgccgattccggagttggcgttcgcatggagcag
aaggggaggactcagcgcgatatctggaatgcggagatttcggagagaaccgagaatcac
cgactattcttgtacctcggtcaccataataagcccgattggccgccgactcacgcggaa
agcgacttcgccgttttcgctgaccgtctcgaagagctaatcagtaatgaatggcctgag
tggggggtcaagatcaatgaactcattgagtccggcctcggctacagcgaaaagaattca
tacacgtacgcgagggcttcgatcgaagctgaaggggaaccgccgatcgtgatcaagcag
atcatcgaaaacgtaaaagcgatggccagggagggccagtga
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