Streptomyces spongiicola: DDQ41_12840
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Entry
DDQ41_12840 CDS
T06937
Name
(GenBank) hypothetical protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo00550
Peptidoglycan biosynthesis
sspo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DDQ41_12840
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspo01002
]
DDQ41_12840
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sspo01011
]
DDQ41_12840
Enzymes [BR:
sspo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DDQ41_12840
Peptidases and inhibitors [BR:
sspo01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
DDQ41_12840
Peptidoglycan biosynthesis and degradation proteins [BR:
sspo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DDQ41_12840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Motif
Other DBs
NCBI-ProteinID:
AWK09660
LinkDB
All DBs
Position
complement(2942187..2945120)
Genome browser
AA seq
977 aa
AA seq
DB search
MSFSSRTGAKGSHRTLVDGSDSGAGGTSATADSGLRHGGGTVAGESPDRSEQQKSSGETT
PGERDPRLAVVRSEGVSSEGRTDQPTAVFRTPSSESSRSSSSSGDGDRGTGRVTGRGSDS
HRGSHVGAGEDTDTDGDAPGAGSGSRTATESGAPEGRPSGGGDRLREAVTAWHSGTDEPG
KDAVSGSAEADADDRLAGSDTPEVARGATEVVDEGARRSVAPAPRKSVDVESAAGPDAGG
RGGRGGRGGGGGGGGNSGEDGARARAPRWAATRTAEGDDATAAEDEATAEGPDGAEAIAS
ADAAGAGEDGGDEGNRTPAGKPVAVGTALPRSAVDQPTTALKITPSAAAPKQAVKPSTAT
SRPGTDRTGSDREGSDRTGSDREGSDRTGSDREGSEWEAERTTALRVTAPPSGSAKPGQG
PAMKPAAESDDRPDAEGAAGSTPPSGGGGVAAPATPVAGAASASEPKSASKSASGPDSAS
ASASKPGPGRASGGAPESAAESAAERTSTFVPLRRDDAPSASKSAPPGRYAAAPSVSVAE
PERTRQQPMPPKPPLDLLAELTNTPPPPQTPVRTLLRRVRIWTPLVVLLLIVFAVVQTMR
PLPENTLSLTAEPAYTFEGAAPQLPWPAKGQAYMAASGLGALGSSGEQKPVPIASVTKSM
TAYVILKNHPLKPGEEGPVIEIDAKGESDGQLDKTDNESTLNTVKKGDKISLRDALAAIM
IPSANNIARQLARWDSGSEKAFVEKMNAAAEELGMENTTYTDPSGLDATTVSTAEDQVKL
GLKLVEIKALTDITKLPEWTDPSGRTWRNYNELPPFDGALGIKTGSTTKAGGNLLFAAHK
MVGDTDQLIVGAVLAQYDTPILGTAIKESKELMLATQDALKNATVVEKGQVVGLVEDGLG
GSVPVVATKDVRAVGWSGLTVKLELTDGGKVLPHEAAPGTVVGSLTVGEGASQVAVPVAL
QQELAEPGFGARLTRLG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttctcgtctaggacgggggccaagggctcacacaggacactggtagatggttcg
gacagtggtgcgggtggtaccagcgccacggcggattcaggtttgcggcacggaggaggc
acggtggcgggcgagtcccccgacaggtcggagcagcagaagtcgtcgggggagacgact
ccgggcgaacgcgatccgcggcttgccgtggtccgttcggagggggtgtcctccgagggg
cggaccgaccagccgacggcggtgttcaggacaccgtcgtcggagtcgtctcggtcgtcg
tcctcgagcggagacggcgacaggggcacgggcagggtcacgggccggggcagtgacagt
cacaggggcagtcacgtgggagcaggcgaggacacggacacggacggggacgcacccggg
gccgggtccggttcccggaccgcgacggagtccggggcccccgagggtcggccgtccggc
ggcggcgaccgcctccgggaagccgtgaccgcatggcactccggtacggacgagcccggg
aaggacgcggtgagcgggtccgcggaggcggacgccgacgatcgcttggcgggctcagac
acccctgaagtcgcccgcggcgcaaccgaggtggtcgatgagggcgcgaggaggtccgtg
gcgcccgcgccccgcaagtccgtcgacgtggaatcggcggccggcccggacgccggcggc
cggggtggccggggtggccggggtggcggcggcggtggcggggggaacagcggcgaggac
ggtgcccgggccagggcgccccgctgggctgcgacccggaccgccgagggcgacgacgcc
accgcagccgaggacgaggccaccgcagagggcccggacggcgccgaggccatcgcgtcg
gcagatgcggccggggccggtgaagacggcggcgacgaggggaaccggacgccggccggc
aaaccggtggccgtcggcaccgcgctgccccggtctgccgtggaccagccgaccaccgcg
ctgaagatcaccccatcggcggcggcaccgaagcaggccgtgaagccctcaacggctacc
agccggccgggcaccgaccgcaccggttcggaccgcgagggctcggaccgtaccggttcg
gaccgcgagggctcggaccgcaccggttcggaccgggagggctcggagtgggaggcggag
cgcaccacggcactcagggtcaccgcacccccgagcgggtcggcgaagcccggacagggg
cctgccatgaagccggcggcggagtccgacgaccgtcccgacgccgagggcgccgccggc
tccacacccccctccggcggcgggggagtggcggccccggccaccccggtcgccggtgcg
gcgtccgcgtccgagcccaagtccgcgtccaagtccgcctcggggccggactccgcgtcc
gcgtccgcgtccaagcccggtcccggccgggcctccggtggtgcccccgagtcggccgcc
gagtcggccgccgagcggaccagcacgttcgtgccgctgcgacgtgacgacgcaccgtct
gcctcgaagtccgccccgcccggccggtacgccgctgccccgtcagtgtcagtcgccgag
cccgagcgcacgcgacagcagcccatgccgcccaagccgccgctcgatctgctggccgaa
ctgaccaacacccctccgcctccgcagaccccggttcggaccctgctgcggcgggtcagg
atctggacgccgctcgtcgtactgctcctgatcgtcttcgctgtcgtacagaccatgcgc
ccgctcccggagaacaccctctcgctgaccgccgagcccgcgtacaccttcgagggtgcc
gccccgcagctgccctggccggccaagggccaggcgtacatggcggcgtccggactcggc
gcgctcggctcctccggcgagcagaagcccgtgccgatcgcgagcgtgaccaagtcgatg
acggcgtacgtaatcctcaagaaccacccgctcaagccgggcgaggaggggcccgtgatc
gagatcgacgccaagggggagtcggacggccagctcgacaagacggacaacgagtcgacg
ctcaacaccgtcaagaagggcgacaagatcagcctgagggacgcgctggcggcgatcatg
attccgtccgcgaacaacatcgcgcggcagctggctcgctgggactcgggctcggagaag
gcgttcgtcgagaagatgaacgccgccgccgaggaactcggcatggagaacacgacctac
acggacccgtccgggctggacgcgacgacggtcagcacggccgaggaccaggtcaagctg
ggtctgaagctggtcgagatcaaggccctgacggacatcaccaagctgccggagtggacg
gacccttcgggcaggacatggcggaactacaacgaactgccgccgttcgacggcgcgctc
ggcatcaagaccggcagcaccaccaaggcgggcggcaatctcctcttcgccgcccacaag
atggtcggtgacacggaccagctgatcgtcggcgccgtgctcgcgcagtacgacaccccg
atcctcggtaccgcgatcaaggagagcaaggagctgatgctcgcgacccaggacgccctg
aagaacgcgacggtcgtcgagaagggccaggtcgtcggactggtcgaggacggtctgggc
ggttcggtcccggtcgtggccaccaaggacgtgcgggcggtcggctggtccgggctcacc
gtgaagctcgagctgacggacggcggcaaggtcctgccgcacgaggccgcgcccggcacg
gtggtcggttcgctgaccgtcggcgagggcgcgagccaggtcgccgtgcccgtcgccctc
cagcaggaactcgcggagcccggcttcggcgccaggctgacccgcctgggctga
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