Streptomyces spongiicola: DDQ41_15030
Help
Entry
DDQ41_15030 CDS
T06937
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_15030
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
DDQ41_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_16
FtsK_SpoIIIE
TrwB_AAD_bind
ResIII
AAA_30
CbiA
Zeta_toxin
T2SSE
Isochorismatase
AAA_6
Motif
Other DBs
NCBI-ProteinID:
AWK09994
LinkDB
All DBs
Position
complement(3421420..3423069)
Genome browser
AA seq
549 aa
AA seq
DB search
MTEPEQPTPSADPSGPADPSGGLRQIASGYAFPGPALELGALLDGGRCLPGAPVRIPLGM
LNRHGLVAGATGTGKTKTLQLLAEQLSSNGVPVFLADMKGDLSGIAAPGQGGEKVEERAA
QVGQDWHAGGFPAEFYALGGIGHGIPVRATVTDFGPMLLSKVLQLNRTQEQSLGLVFHYA
DAKGLELVDLKDLRAVVAFLVSDPGKVELKGIGGLSTATAGVILRAVTLFEQQGASDFFG
EPEFDTGELLRTAPDGRGVVSVLELPGVQDRPRLFSTFLMWLLADLYADLPEVGDLGRPK
LVFFFDEAHLLFNGASKAFLEAVTRTVRLIRSKGVGVFFVTQTPSDVPGDVLGQLGNRVQ
HALRAFTPDDARALKATVRTFPDSAYDLEEVLTSLGTGEAVVTVLNESGAPTPVAVTRLR
APQSLMGPLGDTGLDAAARSSVLYPRYAQAVDRESAYERLTAEQQAAEESALRAAREADA
AREAEEAAREAEEAARGAEPASRTSRRADSPAGQGMGSGLFTSLARSVGTQLGREISRSL
FGTARRRRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcccgagcagccgacgccgtccgcggacccgtccgggccggcggatccctcc
ggcgggttgcggcagatcgcctccggctacgccttccccggacccgctctcgagctgggc
gcgctgctggacggcggccggtgccttcccggagctcccgtcaggatcccgctcggcatg
ctcaaccgccacggtctggtcgccggcgcgaccggcaccggcaagaccaagacgctccag
ctcctcgcggagcagctgtcgtcgaacggtgtccccgtcttcctcgccgacatgaagggc
gacctctccgggatcgccgcgcccggccagggcggggagaaggtggaggagcgagccgcg
caggtgggccaggactggcatgccgggggattccccgcggagttctacgcgctgggcggc
atcggccacggcatccccgtccgcgccaccgtcacggacttcgggccgatgctgctgtcc
aaggtgctccagctcaaccggacgcaggagcagtccctcgggctggtcttccactacgcc
gacgccaagggcctggagctggtggacctcaaggacctgagggccgtggtcgcgttcctg
gtgtcggacccggggaaggtggagctgaagggtatcggcgggctgtccaccgccacggcc
ggggtgatcctgcgggccgtcacgctcttcgagcagcagggtgcgagcgacttcttcggc
gagccggagttcgacacgggcgagctgctgcggacggcgcccgacggacgcggggtcgtg
tccgtgctggaactccccggggtgcaggaccggccgcggctcttctccaccttcctgatg
tggttgctcgcggacctgtacgcggatctgccggaggtcggcgacctcggcaggccgaag
ctggtgttcttcttcgacgaggcgcacctgctgttcaacggagcctccaaggcgttcctg
gaggcggtcacccggacggtgcgtctgatccgctcgaagggcgtcggggtcttcttcgtg
acgcagacccccagcgacgtgcccggtgacgtgctggggcagctgggcaaccgggtgcag
cacgcgctgagggcgttcaccccggacgacgccagggcgctgaaggcgacggtgcggacc
tttccggattccgcgtacgacctggaggaggtcctcacctcgctgggtacgggagaggcg
gtcgtcacggtgctgaacgagtcgggcgcgccgacccccgtcgcggtgacacggctgcgg
gcaccgcagtcgctgatgggtccgctcggcgacaccgggctggacgccgcggcgaggtcc
tccgtgctgtacccgcgctacgcgcaggccgtggaccgggagtcggcgtacgagaggctg
acggcggagcagcaggcggccgaggagtcggcgttgcgtgccgctcgggaggcggatgcc
gcgcgagaagcggaagaggccgcgcgggaggcggaagaggccgcccgcggtgcggaaccc
gcctcccgaacgtcgcggcgggcggactccccggccgggcaggggatgggcagcggtctg
ttcacgtccctggcccgctcggtcggcacccagctcgggcgggagatctcccgttccctc
ttcggcacggcccgcaggcgccgccggtag
DBGET
integrated database retrieval system