KEGG   Streptomyces spongiicola: DDQ41_15030
Entry
DDQ41_15030       CDS       T06937                                 
Name
(GenBank) ATP-binding protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
sspo  Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:sspo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspo03400]
    DDQ41_15030
DNA repair and recombination proteins [BR:sspo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     DDQ41_15030
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 AAA_16 FtsK_SpoIIIE TrwB_AAD_bind ResIII AAA_30 CbiA Zeta_toxin T2SSE Isochorismatase AAA_6
Other DBs
NCBI-ProteinID: AWK09994
LinkDB
Position
complement(3421420..3423069)
AA seq 549 aa
MTEPEQPTPSADPSGPADPSGGLRQIASGYAFPGPALELGALLDGGRCLPGAPVRIPLGM
LNRHGLVAGATGTGKTKTLQLLAEQLSSNGVPVFLADMKGDLSGIAAPGQGGEKVEERAA
QVGQDWHAGGFPAEFYALGGIGHGIPVRATVTDFGPMLLSKVLQLNRTQEQSLGLVFHYA
DAKGLELVDLKDLRAVVAFLVSDPGKVELKGIGGLSTATAGVILRAVTLFEQQGASDFFG
EPEFDTGELLRTAPDGRGVVSVLELPGVQDRPRLFSTFLMWLLADLYADLPEVGDLGRPK
LVFFFDEAHLLFNGASKAFLEAVTRTVRLIRSKGVGVFFVTQTPSDVPGDVLGQLGNRVQ
HALRAFTPDDARALKATVRTFPDSAYDLEEVLTSLGTGEAVVTVLNESGAPTPVAVTRLR
APQSLMGPLGDTGLDAAARSSVLYPRYAQAVDRESAYERLTAEQQAAEESALRAAREADA
AREAEEAAREAEEAARGAEPASRTSRRADSPAGQGMGSGLFTSLARSVGTQLGREISRSL
FGTARRRRR
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgactgagcccgagcagccgacgccgtccgcggacccgtccgggccggcggatccctcc
ggcgggttgcggcagatcgcctccggctacgccttccccggacccgctctcgagctgggc
gcgctgctggacggcggccggtgccttcccggagctcccgtcaggatcccgctcggcatg
ctcaaccgccacggtctggtcgccggcgcgaccggcaccggcaagaccaagacgctccag
ctcctcgcggagcagctgtcgtcgaacggtgtccccgtcttcctcgccgacatgaagggc
gacctctccgggatcgccgcgcccggccagggcggggagaaggtggaggagcgagccgcg
caggtgggccaggactggcatgccgggggattccccgcggagttctacgcgctgggcggc
atcggccacggcatccccgtccgcgccaccgtcacggacttcgggccgatgctgctgtcc
aaggtgctccagctcaaccggacgcaggagcagtccctcgggctggtcttccactacgcc
gacgccaagggcctggagctggtggacctcaaggacctgagggccgtggtcgcgttcctg
gtgtcggacccggggaaggtggagctgaagggtatcggcgggctgtccaccgccacggcc
ggggtgatcctgcgggccgtcacgctcttcgagcagcagggtgcgagcgacttcttcggc
gagccggagttcgacacgggcgagctgctgcggacggcgcccgacggacgcggggtcgtg
tccgtgctggaactccccggggtgcaggaccggccgcggctcttctccaccttcctgatg
tggttgctcgcggacctgtacgcggatctgccggaggtcggcgacctcggcaggccgaag
ctggtgttcttcttcgacgaggcgcacctgctgttcaacggagcctccaaggcgttcctg
gaggcggtcacccggacggtgcgtctgatccgctcgaagggcgtcggggtcttcttcgtg
acgcagacccccagcgacgtgcccggtgacgtgctggggcagctgggcaaccgggtgcag
cacgcgctgagggcgttcaccccggacgacgccagggcgctgaaggcgacggtgcggacc
tttccggattccgcgtacgacctggaggaggtcctcacctcgctgggtacgggagaggcg
gtcgtcacggtgctgaacgagtcgggcgcgccgacccccgtcgcggtgacacggctgcgg
gcaccgcagtcgctgatgggtccgctcggcgacaccgggctggacgccgcggcgaggtcc
tccgtgctgtacccgcgctacgcgcaggccgtggaccgggagtcggcgtacgagaggctg
acggcggagcagcaggcggccgaggagtcggcgttgcgtgccgctcgggaggcggatgcc
gcgcgagaagcggaagaggccgcgcgggaggcggaagaggccgcccgcggtgcggaaccc
gcctcccgaacgtcgcggcgggcggactccccggccgggcaggggatgggcagcggtctg
ttcacgtccctggcccgctcggtcggcacccagctcgggcgggagatctcccgttccctc
ttcggcacggcccgcaggcgccgccggtag

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