Streptomyces spongiicola: DDQ41_15290
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Entry
DDQ41_15290 CDS
T06937
Name
(GenBank) PAS domain S-box protein
Organism
sspo
Streptomyces spongiicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Response_reg
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
AWK10033
UniProt:
A0ABM6V7B4
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All DBs
Position
3478398..3482747
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AA seq
1449 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDGLVLVNCNGTVVNANTIALEMFEAPGTALVGRGLLDLLP
AFDSKLIPGSMRRPDSVGKRGRTKPTRMVARRTDGVEFPAEVTSAGLEDGRAAYASPGTG
GGTGYTGDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAAAEGVVGTDTDGRVVLVNP
AAAQILGFRASDLGGKELHPLVLHSRPDGEPFPYDESPLADTLKSGRKHRVRGQVLWAKD
GREVPVDLTTAPVRDGEQLVGAVMTFTDRRPYEEQAERHAAEIAERDEKYSTDIAELDEK
YATDLAERDQRHAAELAELAEKHTAETADRAEKYAAEIETRDEREASLNARYAQLAAVLG
DALRGPLEELRRELGKLAADPAGQLWPEANQILHHLAAGYARMTTLVDNVLGFQRLDSGA
ERLHKAVVLLDAVVAAGVEGAVELIGPGRAQFAVHAPPIEAEVDGVRLATALAHLVADVA
GIDSTGKARVVPGTGYVDSTIVVAAAQRGDVVRIEVRGPHSGGDPVHEPIVRGIVTAHGG
VLQTHEVPGTGGSAYVLEVPLGEGAGTVAPPAGPPEQQAPAGPLEQQAPAALPAQTTSGG
GRRRARRASTDAFLESPVGPGDTPVPPGFPGRHQADTDTDASGGAGGSAGTVPGGPTPAA
TGGTGRRRGRPSPAEAELVALPAAQDGLVVTAAEAGAGRPALGDTVPPQGVGPEAAAREG
TGRRARRARAALPALPSAGSVPDAPAAVGRPTGRSDGQAVGQPVGQPVGQDIAALEPAVT
AAASGTGGSGNGNGSGSTGGGSGAQQGDRRARRALAAGNGRQVPAEEPRGPFALPPAEAD
RTPPSGAPDEGRHDPARPEPESDHTPPQPHPVPTGRRRARPAEGGTPGQGIPAQAGPVPP
QTGPVTPPTNPVPPPASPAMPDVLGPVPPAIPGPVPPAAPGPVPSPVPPAIPGPVPSPVP
PAIPGPVPSPVPPAIPGPMTPPSGTVTPPAGPAMPEAPGPVPPAVPGPRPAANTAHAGDT
GSVPLPPAAPVPAEPPAPSRRAAQPLPAEAPTPAAGTATPMPAPEPVDPDASQGRAFSVR
TLGQGVPLTQRLAQQQDRQAVPAVPAVPAASPPQAASGGQTLGSGRRRKLATRQEGERQV
SETGARPHPHPQPAPAPSPAQRLGAPTEGRAYAIGAPDEGAEGPEPLDGPGGAIEVANRP
APLPLDDELPPEPLDNPRRLLVWPAPDAATQQALSDRGYRPVIVHSREEVDAQIAAFPAA
LFVDPLTGPITRTALQALRQAAVAAEVPVLLAAGLGQATREAAYGADPAVLLKALAPRDS
EQHPSRVLLIEQHADISAALTATLERRGMQVARAAADADAVTLAQQTRPNLVVMDLMQVR
RRRAGIIDWLRASGQLNRTPLVVYTSAGLDQAELPKLSSGETVLFLAERSTSAEVQDRIV
DLLAKIGTN
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgccgccatactcgacgcgctcccg
gacgggctcgtcctcgtcaactgcaacggcacggtcgtcaacgccaacaccatcgccctc
gagatgttcgaggcccccggcaccgcgctcgtcgggcgcgggctcctcgacctgctgccg
gcgttcgactccaagctcatcccgggctcgatgcgtcgccccgactccgtcggcaagcgc
ggccgtacgaagccgacccggatggtcgcccgccgcaccgacggcgtcgagttccccgcg
gaggtgaccagcgccggtctggaggacgggcgcgcggcgtacgcatcgcccggcaccggc
ggaggcaccggctacaccggcgacgaactgctgatgctcgtcgtgcgcgacctgtccggc
accgtcgacaccgaggccgaactcgcgcgctcccagcggcagaccgagatgatcctgcgg
gcggccgccgagggcgtcgtcggcacggacaccgacggccgcgtcgtgctcgtcaacccg
gccgccgcccagatcctcggcttccgcgccagcgacctcggcggcaaggaactgcacccg
ctggtcctgcactcgcgcccggacggcgagccgttcccgtacgacgagtccccgctcgcc
gacacgctcaagtccgggcgcaagcaccgggtccgcggccaggtgctgtgggccaaggac
ggcagggaggtgccggtcgatctgaccaccgcgccggtgcgcgacggggagcagctggtc
ggcgcggtcatgacgttcaccgaccggcggccctacgaggagcaggctgagcggcacgcc
gccgagatcgccgagcgggacgagaagtacagcacggacatcgccgaactcgacgagaag
tacgcgacggacctggccgagcgggaccagcggcacgcggccgaactggcggagctggcc
gagaagcacaccgccgagacggcggacagggccgagaagtacgccgcggagatcgagacc
cgcgacgagcgggaagcctcgctgaacgcccggtacgcccagctggccgcggtgctcggg
gacgcgctgcgcgggccacttgaggagctgcgccgcgaactcgggaagctggccgccgat
ccggccggccagctgtggccggaggccaaccagatcctccaccacctggccgcgggctac
gcccggatgacgacgctggtcgacaacgtcctgggcttccagcggctggactccggcgcg
gagcggctgcacaaggccgtcgtcctgctcgacgcggtggtggccgcgggtgtcgagggc
gcggtcgagctgatcggtcccggacgggcgcagttcgcggtccacgccccgccgatcgag
gccgaggtggacggcgtacggctggcgaccgcgctggcgcatctggtcgccgacgtcgcg
gggatcgactcgacgggcaaggcgagggtggtacccggaaccgggtacgtcgactcgacc
atcgtggtcgccgcggcgcagcggggcgacgtcgtacggatcgaggtgcgcggtccccac
tccggcggcgacccggtgcacgagcccatcgtccgcggcatcgtgacggcacacggcggt
gtgctgcagacgcacgaggtgccgggcacgggcggcagcgcctatgtcctggaggtgccg
ctcggcgagggagccggcacggtggcgcccccggcggggcccccggaacagcaggcgccg
gcgggacccctggagcagcaggctccggctgccctcccggcgcagaccacgtccggtggc
ggacggcggcgggcccggcgcgcctcgacggacgcgttcctggagagcccggtgggcccc
ggggacacgccggtgccccccggtttcccagggcggcaccaggcggatacggacacggac
gcgagcggtggggcgggcggatcagccggaaccgtacccggcgggcccaccccggcggcg
accggcggcacgggccgtcgacgcggccgcccgagccccgcagaggccgaactggtcgcg
ctcccggctgcacaggacggcttggtcgtcaccgcggcggaggccggagccggccgcccg
gcgctgggtgacacggtcccgccgcagggggtgggtccggaagccgcggcccgggagggc
accgggcggcgggcccggcgcgcccgcgcggcacttcccgcgctgccttcggcgggctcg
gtccccgacgccccggcggccgtgggacggccgaccggccggagcgacggacaggccgtc
ggacagccggtcggacaacctgtcggacaggacatcgccgcgctggaacccgccgtcacg
gcagcggcttccggcaccggtggcagcggcaacggcaacggcagcggcagcacgggtggc
ggcagcggagcacagcagggcgatcggcgagcgcgccgggcgctcgcggccggcaacggc
cggcaggttcccgcggaggaaccgcgcggcccgttcgcgcttccccccgccgaggccgac
cgcaccccgccgtcaggtgctcccgacgagggccgccacgacccggcgcgcccggagccg
gaatctgaccacaccccgccgcagccgcaccccgtgcccaccgggcgccggcgggcccgc
ccggccgagggcggaacaccgggccagggcatccccgcgcaggccggcccggtgccaccg
caaaccggcccggtgaccccgccgacaaacccggtgcccccgccggcgagcccggcgatg
cccgatgtgcttggtccggtgccacccgccatccccggtccggtgccacccgccgcgccc
ggtccggtgcccagcccggtgccacccgccatccccggtccggtgcccagcccggtacca
cccgccatccccggtccggtgcccagcccggtaccacccgccatccccggtccgatgact
ccaccgtccggcacggtgaccccgccggccggccccgcgatgcccgaagcgcccggtccg
gtgccgcccgccgtgcccggcccccgtcccgcagcgaataccgcgcacgccggtgacacc
ggttcggtaccgctgcccccggcggcgccggtcccggccgagccgcccgcaccgtcccgc
cgcgccgcccagcccctcccggccgaggcaccgactcccgcggccgggacggccacgccg
atgcccgccccggagccggtggaccccgacgcctcacagggcagggcgttcagcgtgcgc
accctcggtcagggcgtaccgctcacccagcggctcgcccagcagcaggaccggcaggcc
gtacccgccgtgcccgccgtacccgccgcatccccgccgcaggcagcatccggcggtcag
accctcggctccggccgccgccgaaaactggccacccggcaggagggcgagcgccaggtg
tccgagacgggggcgcgaccgcacccgcaccctcaaccggcgcccgcccccagccctgcg
cagcggctcggcgctcccaccgagggccgggcctacgcgatcggcgccccggacgagggc
gcggagggcccggagccgctggacggccccggtggcgcgatcgaggtcgccaaccggccg
gcgcccctgcccctcgacgacgaactccctccggagcccctggacaacccgcgccggctg
ctggtctggccggcgcccgacgccgccacccagcaggcactgagcgaccgcggctaccgt
ccggtgatcgtgcactcccgcgaggaggtcgacgcgcagatcgccgcgtttccggccgct
ctgttcgtcgacccgctgaccgggcctatcacccgtaccgcgctgcaggcgctccgtcag
gccgcggtggcggccgaggtccccgtgctgctggcggcggggctgggccaggcgacgcgc
gaggccgcgtacggagcggaccccgccgtgctgctgaaggccctggcgccgcgcgacagt
gagcagcacccgtcccgcgtgctgctgatcgagcagcacgccgacatctccgccgcgctg
acggccaccctggagcggcgcgggatgcaggtcgcgcgggcggcggccgacgcggacgcg
gtgacgctcgcccagcagacacgcccgaaccttgtggtcatggacctgatgcaggtgcgc
cgccggcgcgcagggatcatcgactggctgcgcgcgagcgggcagttgaaccgcaccccg
ctcgtcgtctacacctcggccggactcgatcaggcggagctgccgaaactctcctcgggc
gagaccgtcctcttcctggcggagcgttccacgagcgccgaggtccaggaccggatcgtg
gacctgctcgcgaagatcggcacgaactga
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