Streptomyces spongiicola: DDQ41_16760
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Entry
DDQ41_16760 CDS
T06937
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo00521
Streptomycin biosynthesis
sspo00523
Polyketide sugar unit biosynthesis
sspo00525
Acarbose and validamycin biosynthesis
sspo00541
Biosynthesis of various nucleotide sugars
sspo01055
Biosynthesis of vancomycin group antibiotics
sspo01100
Metabolic pathways
sspo01110
Biosynthesis of secondary metabolites
sspo01250
Biosynthesis of nucleotide sugars
Module
sspo_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DDQ41_16760 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DDQ41_16760 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DDQ41_16760 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DDQ41_16760 (rfbB)
00525 Acarbose and validamycin biosynthesis
DDQ41_16760 (rfbB)
Enzymes [BR:
sspo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DDQ41_16760 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
AWK10279
UniProt:
A0A2S1Z1Q0
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Position
3817445..3818419
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AA seq
324 aa
AA seq
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MRTLVTGGAGFIGSEYVRRLLDADPTARITVLDSLAYSGVEANLAQVARHPGYRFVRGDI
CDPDTVDQVTAGHDAVVHFAAESHVDRSIEGAGPFVRTNVVGTQVLLDAALRHRVGRFLH
VSTDEVYGSISEGSWTETSPLAPNSPYSASKSAADLLVLAYHRTHGLDAVVTRCTNNYGP
HQFPEKVVPLFITRLIEGRSIPLYGDGRNIRDWLHVSDHCRGIELALRGGKAGEVYHIGG
GTEVSNHKLTGLLLDAVGADWDRVEYVADRKGHDLRYSLDDSKIREQLGYAPLVPFAEGL
AATVAWYRGNRSWWEPLRARAELR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccctcgtcaccggcggcgccggcttcatcggttcggagtacgtccggcggctg
ctggacgccgacccgacggcgcgcatcacggtcctcgacagcctcgcgtactccggagtc
gaggcgaacctggcacaggtggcccggcaccccgggtaccggttcgtccgcggcgacatc
tgcgaccccgacaccgtcgaccaggtgacggcgggccatgacgccgtcgtgcacttcgcg
gccgagtcgcacgtggaccggtcgatcgagggggcgggcccgttcgtccgcaccaacgtc
gtcggtacccaggtcctgctggacgcggcgctccgccaccgcgtgggacggttcctgcac
gtgtcgacggacgaggtgtacggctccatcagcgagggctcgtggacggagacgtccccg
ctggcgcccaactcgccgtactccgcctccaagagcgccgccgacctgctcgtgctcgcc
taccaccgcacgcacggcctggacgcggtcgtcacccggtgcaccaacaactacgggccc
caccagttccccgagaaggtcgtcccgctcttcatcacccgcctgatcgaggggcgttcg
atccccctctacggggacggccgcaacatccgggactggctgcacgtctccgaccactgc
cggggcatcgaactcgccctgcgcggggggaaggccggagaggtctaccacatcggcggc
gggaccgaggtcagcaaccacaagctcaccggactactgctggacgccgtcggcgcggac
tgggaccgcgtcgagtacgtggccgaccgcaagggccacgacctgcgctactcgctcgac
gactccaagatccgggagcagctcggctacgcgccgctggtccccttcgccgaagggctg
gccgccaccgtcgcctggtaccgcggcaaccggtcctggtgggagccgctcagggcccgg
gcggagctgcggtga
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