Streptomyces spongiicola: DDQ41_17840
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Entry
DDQ41_17840 CDS
T06937
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo00550
Peptidoglycan biosynthesis
sspo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DDQ41_17840 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sspo01002
]
DDQ41_17840 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sspo01011
]
DDQ41_17840 (dacB)
Enzymes [BR:
sspo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DDQ41_17840 (dacB)
Peptidases and inhibitors [BR:
sspo01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DDQ41_17840 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sspo01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DDQ41_17840 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AWK10449
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All DBs
Position
4050306..4051670
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AA seq
454 aa
AA seq
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MAGLALAAAAVAAVGPWDNGQRKAEREHAAALGRTGGADHQVTGRGREAAEAPGPAPAPS
APGVLAAASAPKMPAVAPAALADALGPLLADPGLGPLRTASVVDAATGEQLYARGAGTAM
VPASTVKIATAAAVLSATGPAHRIPTRAVATPDFRAVTLVGGGDPTLDLPRMRTLADRTA
KALRDRGVTTVRLTYDASLYQGPASHPIGPGNDNIAPVTALMVNAGRLDDSTEGTAPRST
DPAGDAARAFVGLLSEHGVNTESGPVPGRAPAKGPALAATHSAPVPVLVERMLTSSDNDI
AEALARQTALATRRPASFAGAEAAVTDRLRRLKLPLAGARFADGSGLNRADRVSAALLTT
LLVRAADPAHPELRPVLTGLPVAGFTGTLSGRAAAGSGGLVRAKTGTLRGVDTLAGTVMS
ADGRLLAFAFLAGDTPSASAARPALDRLAAALLP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtggccggcctcgccttggcggcggcggcggtggccgcggtcggcccctgggacaacggc
cagcgtaaggccgagcgcgagcacgccgccgccctcggccggacaggtggcgcagatcac
caggtcacggggcgcgggcgcgaagcggcggaggctcccgggcccgcgccggcgccgagc
gcccccggtgtactcgccgccgcgagcgcccccaagatgcccgcggtcgcgcccgccgca
ctcgccgacgccctcggccccctgctggccgacccgggcctcggcccgctgcgcaccgcc
tccgtcgtggacgccgccaccggcgaacagctgtacgcccggggcgccggcacggccatg
gtcccggcctccaccgtcaagatcgccacagccgcggcggtgctgtccgccaccggcccc
gcgcaccggatcccgaccagggccgtcgccaccccggacttccgggcggtcaccctggtc
ggcggcggggaccccaccctcgacctgccccggatgcggaccctcgccgaccggaccgcg
aaggccctgcgcgaccggggcgtcaccacggtccggctcacctacgacgcctcgctctac
cagggccccgccagccaccccatcggcccaggcaacgacaacatcgcccccgtcaccgcc
ctgatggtcaacgcggggcgcctcgacgactcgacggagggcaccgcaccccgcagcacc
gaccccgcgggcgacgccgcccgcgccttcgtcggcctgctcagcgagcacggcgtgaac
accgagtcgggccccgtcccgggcagggcaccggcgaaggggcccgccctcgccgccacc
cactcggcgccggtcccggtactcgtcgagcggatgctgaccagcagcgacaacgacatc
gccgaggcactggcccggcagaccgccctcgccacgcgccgcccggcgagcttcgccggg
gcggaggccgcggtgaccgaccggctcaggcggctgaagctgcccctggccggagcgcgc
ttcgccgacggcagcgggctgaaccgcgccgacagggtctcggccgcactcctcaccacg
ctgctggtccgggccgccgatcccgcccaccccgagctgcgccccgtactcaccggactg
cccgtcgccggcttcaccggcacgctcagcgggcgcgccgccgccgggtccggcggcctg
gtgagggccaagaccggcacgctcaggggcgtggacacgctcgccggaacggtcatgtcc
gccgacggccggttgctcgcgttcgccttcctcgccggtgacacgccgtccgcgtccgcg
gcccgccccgccctcgaccgcctcgcggccgccctgctgccctga
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