Streptomyces spongiicola: DDQ41_19050
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Entry
DDQ41_19050 CDS
T06937
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspo03016
]
DDQ41_19050
Enzymes [BR:
sspo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DDQ41_19050
Transfer RNA biogenesis [BR:
sspo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DDQ41_19050
Prokaryotic type
DDQ41_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Rod_cone_degen
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AWK10652
UniProt:
A0A2S1Z2Y1
LinkDB
All DBs
Position
4296874..4297743
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AA seq
289 aa
AA seq
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MSDDVRPGFVRVRLDLSYDGRDFSGWARQTRGRRTVQAEIEDAIRTVTRSRDTYDLTVAG
RTDAGVHARGQVAHVDLPQDLWAEHRDKLLRRLAGRLPHDVRVWKAEEAPDGFNARFSAI
WRRYAYRVTDHPSGVDPLLRGHVLRHDRPLDADAMNAAAERLLGEHDFAAYCKKREGATT
IRTLRELRWERDASGILTATVRADAFCHNMVRSLVGAMLFVGDGHRPADWPALVLAAGVR
DSAVHVVRPHGLTLEEVGYPADGLLAARNLEARNRRTLPDRGAGAAGCC
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacgtgaggcccggcttcgtccgggtgcggctggacctgtcctacgacggc
agggacttctcgggctgggcccgccagacacgtgggcggcggacggtccaggccgagatc
gaggacgcgatccgtaccgtgacccgttcgcgggacacgtacgacctgaccgtcgccggc
cgcaccgacgcgggggtgcacgcccgcggccaggtcgcgcacgtcgatctgccccaggac
ctctgggcggagcaccgggacaagctgctgcggcggctcgccggacggctgccccacgac
gtccgggtctggaaggccgaggaggcgccggacggtttcaacgcccgcttctcggcgatc
tggcgccgctacgcctaccgggtcaccgaccacccgtccggcgtcgacccgctgctgcgc
ggccatgtcctccggcacgaccggccgttggacgctgacgccatgaacgcggcggccgaa
cggctcctcggggaacacgacttcgccgcctactgcaagaagcgcgagggcgccaccacc
atccggaccctccgggagctgcgctgggagcgggacgcgtcggggatcctcaccgcgacc
gtgcgggccgacgccttctgccacaacatggtccgctcgctcgtcggcgcgatgctgttc
gtcggcgacggccaccgtccggcggactggccggccctggtgctggccgccggcgtgcgt
gactcggcggtccatgtcgtgcggccgcacgggctcaccctggaggaggtcggctatccc
gccgacgggctgctggccgccaggaacctcgaggcgcgcaaccggcgtacgctgccggac
cgcggcgcgggggcggcgggctgctgctga
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