Streptomyces spongiicola: DDQ41_19245
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Entry
DDQ41_19245 CDS
T06937
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DDQ41_19245 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspo03019
]
DDQ41_19245 (groL)
03110 Chaperones and folding catalysts [BR:
sspo03110
]
DDQ41_19245 (groL)
03029 Mitochondrial biogenesis [BR:
sspo03029
]
DDQ41_19245 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspo04147
]
DDQ41_19245 (groL)
Enzymes [BR:
sspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DDQ41_19245 (groL)
Messenger RNA biogenesis [BR:
sspo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DDQ41_19245 (groL)
Chaperones and folding catalysts [BR:
sspo03110
]
Heat shock proteins
HSP60 / Chaperonin
DDQ41_19245 (groL)
Mitochondrial biogenesis [BR:
sspo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DDQ41_19245 (groL)
Exosome [BR:
sspo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DDQ41_19245 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DDQ41_19245 (groL)
Exosomal proteins of breast cancer cells
DDQ41_19245 (groL)
Exosomal proteins of colorectal cancer cells
DDQ41_19245 (groL)
Exosomal proteins of bladder cancer cells
DDQ41_19245 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AWK10683
UniProt:
A0A2S1Z347
LinkDB
All DBs
Position
4335091..4336713
Genome browser
AA seq
540 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPRGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLRNVAAGASPAALKKGID
AAVKAVSDELISTARPIEEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYMVTDQERMEAVLDDPYILINQGKISSIQDLLPLLEKVIQ
AGASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATV
IAEEVGLKLDQAGLDVLGTARRVTVTKDDTTVVDGGGKSEDVAGRIAQIKAEIEATDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGKDGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITAKVAELDKGNGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPAEAGHGHGHAH
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagctcgccgacacggtcaaggtgacgatcggccccaggggccgcaacgtcgtgatcgac
aagaagttcggtgcccccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggcgacggcaccaccaccgccaccgtgctcgcccaggccctggtccgc
gagggtctgcgcaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgacgagctgatcagcaccgcgcggccgatcgaggagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggttacctgtcgccg
tacatggtgaccgaccaggagcgtatggaggccgtcctcgacgacccgtacatcctcatc
aaccagggcaagatctcctccatccaggacctgctgccgctgctggagaaggtcatccag
gccggtgcctccaagccgctgctgatcatcgccgaggacgtggagggcgaggccctgtcc
accctcgtcgtcaacaagatccgcggcaccttcaacgcggtcgcggtcaaggcccccggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggccaccctcaccggtgccaccgtc
atcgccgaggaggtcggcctcaagctcgaccaggccggtctggacgtgctgggcaccgcc
cgccgggtcaccgtcaccaaggacgacaccaccgtcgtcgacggcggcggcaagagcgag
gacgtggccggccgtatcgcgcagatcaaggccgagatcgaggccacggactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgccctggtc
cacgccgtcaaggtgctggagggcaacctcggcaaggacggcgacgaggccaccggtgtc
gcggtcgtgcgccgcgccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcaccgccaaggtcgcggagctggacaagggcaacggcttcaacgcc
gccaccggcgagtacggcgacctggtgaaggccggcgtcatcgacccggtcaaggtcacc
cgctcggccctggagaacgccgcctcgatcgcctccctgctgctcaccaccgagaccctc
gtggtggagaagaaggaagaggagccggcggaggcgggccacggtcacggccacgcgcac
tga
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