KEGG   Streptomyces spongiicola: DDQ41_20745
Entry
DDQ41_20745       CDS       T06937                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sspo  Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:sspo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sspo03032]
    DDQ41_20745
   03036 Chromosome and associated proteins [BR:sspo03036]
    DDQ41_20745
   03400 DNA repair and recombination proteins [BR:sspo03400]
    DDQ41_20745
DNA replication proteins [BR:sspo03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DDQ41_20745
Chromosome and associated proteins [BR:sspo03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DDQ41_20745
DNA repair and recombination proteins [BR:sspo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DDQ41_20745
SSDB
Motif
Pfam: Bac_DNA_binding HC2
Other DBs
NCBI-ProteinID: AWK10932
UniProt: A0A2S1Z3N8
LinkDB
Position
4713718..4714338
AA seq 206 aa
MNKAQLVEAIADKMGGRQQAADAVDAVLDAIVRAVVGGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGTKKLPRGGEVSVKKAPKGSLQMGAAAKKAA
AKKATAKKAAAKKTTAKKTTAKKAAAKKTTAKKTTAKKAAAKKTTAKKTAAAKKTAPAKK
AAAKKAPAKKASARKTSAKKATARKK
NT seq 621 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggccggcagcaggcc
gccgacgctgtcgacgcggtcctcgacgcgatcgtccgcgcggttgtcggcggcgaccgg
gtttcggtcaccggcttcggctcgttcgagaaggtggaccgtccggcccgctacgcccgc
aacccgcagacgggcgagcgcgtgcgggtcaagaagacctcggtgccgcgattccgcgcg
ggccagggcttcaaggacctggtgagcggcacgaagaagctccccaggggtggcgaagtg
tccgtcaagaaggctcccaagggcagcctccagatgggagccgccgcgaagaaggccgca
gccaagaaggcgacggcgaagaaggcggcggcgaagaagaccaccgccaagaagaccacg
gcgaagaaggcggcggcgaagaagaccaccgccaagaagaccacggcgaagaaggcggcg
gcgaagaagaccaccgcgaagaagacggccgcggcgaagaagaccgctcccgccaagaag
gcggcggccaagaaggcgccggcgaagaaggccagcgcgcgcaagacctccgccaagaag
gccaccgcccgcaagaagtag

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