Streptomyces spongiicola: DDQ41_23445
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Entry
DDQ41_23445 CDS
T06937
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
sspo
Streptomyces spongiicola
Pathway
sspo00550
Peptidoglycan biosynthesis
sspo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DDQ41_23445
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sspo01011
]
DDQ41_23445
Peptidoglycan biosynthesis and degradation proteins [BR:
sspo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DDQ41_23445
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AWK11375
LinkDB
All DBs
Position
complement(5337698..5339167)
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AA seq
489 aa
AA seq
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MRRYIRRAAGLSLFLLAALLVNAVRVQVLQAEDLNGSPANRRPAIARYGEPRGDVFAGGR
PVTGSKDTGEQLRYERTYPDGPLYAPVTGYSSQKYGTTLLEHAEDGVLSGTDPALAPLPF
WNEFTRSRQPGGRVLTTIRRSAQEAAYRGLNGRRGAVAAIEPATGRILALVSSPSYDPGL
LSGNSPAVTEAWRRLNAAESHPMLNRAIRQTYPPGSTFKIVTAAAALEARVVTDPDAPTD
TADPFVIPGTRTTLPNPVPGCRRASLVYAIKWSCNTVMANLGVKVGLEGMLGTAGRFGFN
DDSLRIPSGVAVSGFDRRMSVDQLALSSIGQFDTTATPLQMAMVAAAVANGGELAYPYLV
ERTTTWDGDTVRETPRRSYRRAMFPATAHELRRMMVEAAERGTGTRALIDGVTVGGKTGT
AQHGVGNAGTPYAWFIAWAQDRGAPRPAVAVAVVVEDPEAAGGEISGGGDAAPIARAVMV
EALKPETSR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
gtgagacggtacatccggcgcgcggccggtctgagcctgttcctgctcgccgcgctgctg
gtgaacgccgtacgcgtccaggtgctacaggccgaggacctcaacggcagtccggcgaac
cggcgtccggccatcgcacgctacggcgaaccgcgcggggacgtcttcgccggcggcaga
ccggtcacgggctcgaaggacaccggagagcaactgcggtacgagcgcacctatccggac
ggccccctgtacgcgccggtcaccggctactcctcgcagaagtacggcacgaccctgctc
gagcacgcggaggacggcgtgctctcgggtaccgacccggcgctcgccccgctgccgttc
tggaacgagttcactcgctcccggcagcccggcggccgggtcctgaccacgatcaggcgg
tccgcgcaggaggccgcctaccggggcctgaacggcaggcgcggcgcggtcgccgcgatc
gagccggcgacggggagaatcctggcgctggtcagcagcccctcgtacgatcccgggctg
ctgtccggcaacagcccggcggtcaccgaggcatggcgccgactcaacgcggcggagagc
cacccgatgctcaaccgggcgatccggcagacctatccgcccggctccaccttcaagatc
gtcacagccgccgccgcgctggaggcgcgggtggtcacggacccggacgcccccacggac
acggcggacccgttcgtcatccccggcaccaggaccaccctgccgaacccggtgccgggc
tgccggcgcgcgtccctggtgtacgcgatcaagtggtcgtgcaacacggtgatggcgaac
ctcggcgtgaaggtggggctggagggcatgctcgggaccgccggccgcttcggcttcaac
gacgactcgctgcgaatcccgtccggtgtggcggtgtccggcttcgaccggcgcatgagc
gtggaccagctggcgctgtcgtccatcggccagttcgacaccacggccacgcccctgcag
atggccatggtggccgcggcggtcgccaacgggggcgagctggcctacccgtatctggtg
gagcgcacgaccacctgggacggggacacggtacgggagacaccccgccggtcctaccgc
cgcgcgatgttcccggcgaccgcgcacgaactgcggcggatgatggtcgaggcggcggag
cggggcacgggcacgcgggcactgatcgacggggtgaccgtgggcggcaagaccggcacc
gcccagcacggcgtcggcaacgccggcactccgtacgcctggttcatcgcctgggcccag
gaccgcggcgcgccccggcccgcggtggccgtcgcggtggtcgtcgaggacccggaggcg
gcgggcggcgagatcagcggcggcggcgacgcggcgccgatcgcacgggcggtgatggtc
gaggcgctgaagccggagacgagccgctga
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