KEGG   Streptomyces spongiicola: DDQ41_23510
Entry
DDQ41_23510       CDS       T06937                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sspo  Streptomyces spongiicola
Pathway
sspo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sspo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DDQ41_23510 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sspo03400]
    DDQ41_23510 (xth)
Enzymes [BR:sspo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     DDQ41_23510 (xth)
DNA repair and recombination proteins [BR:sspo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     DDQ41_23510 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AWK11386
UniProt: A0A2S1Z4W7
LinkDB
Position
5354754..5355533
AA seq 259 aa
MRIATFNVNSITARLPRLLAWLEGSGTDVLCVQEAKCTAEQFPVDALKELGYESAVNADG
RWNGVAVLSRVGLEDVVKGLPGGPEYGGVQEPRAVSATCGPVRVWSVYVPNGREVAHEHY
AYKLAWLEALRAAVAEDAASGRPFAVLGDYNIAPTDDDVWDPSFFEGMTHVTGPERAALA
GLREAGLADVVPRPLKYDHPFTYWDYRQLGFPKNRGMRIDLVYGNEPFTAAVKDSYVDRE
ERKGKGASDHAPVVVDLDL
NT seq 780 nt   +upstreamnt  +downstreamnt
atgcgcatcgccaccttcaacgtcaattcgatcaccgcccgcctgccgcggctgctggcc
tggctggagggcagcggcacggacgtgctgtgcgtccaggaggccaagtgcaccgccgag
cagttcccggtggacgccctcaaggagctcggctacgagtccgcggtcaacgccgacggc
aggtggaacggtgtggcggtgctctcccgggtgggcctcgaggacgtcgtgaagggcctc
cccggcggcccggagtacggcggagtgcaggagccccgggcggtgagcgccacctgcggc
ccggtccgcgtctggtcggtgtacgtgccgaacggccgcgaggtcgcccatgagcactac
gcgtacaagctggcctggctggaggcgctgagggccgcggtcgcggaggacgcggcgtcc
ggccgcccgttcgcggtgctcggcgactacaacatcgcgccgaccgacgacgacgtgtgg
gatccgtccttcttcgaggggatgacccatgtgaccgggccggagcgcgccgcactggcc
gggctgcgcgaggcgggcctcgccgacgtggtcccgcgcccgctgaagtacgaccacccg
ttcacgtactgggactaccgccagctgggcttccccaagaaccggggtatgcgcatcgac
ctggtgtacggcaacgagccgttcaccgcggccgtcaaggacagctatgtcgaccgcgag
gagcgcaagggcaagggcgcctcggaccacgcccccgtggtggtcgacctcgatctctga

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