Streptomyces spongiicola: DDQ41_24265 Help Entry DDQ41_24265       CDS       T06937                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism sspo  Streptomyces spongiicola Brite KEGG Orthology (KO) [BR:sspo00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sspo03400]     DDQ41_24265 Enzymes [BR:sspo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      DDQ41_24265     5.6.2.6  RNA 3'-5' helicase      DDQ41_24265 DNA repair and recombination proteins [BR:sspo03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     DDQ41_24265 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr WH3_Lhr DEAD WH2_Lhr Helicase_C ResIII AbiEi_4 DUF6406 AAA_25 PhoH Motif Other DBs NCBI-ProteinID:  AWK13112 LinkDB All DBs Position complement(5541868..5546490) Genome browser AA seq 1540 aa AA seqDB search MVGSALDTFAPATRGWFTGAFSAPTAAQEGAWRAIGRGSDVLVVAPTGSGKTLAAFLAAL DGLTSAPPPAETGKRCRVLYVSPLKALAVDVERNLRSPLTGIRQEAVRLGLPEPEVRVGI RSGDTPAAERRALATRPPDILITTPESLFLMLTSSAREALGGVETVIVDEVHAVAGTKRG AHLALSLERLDELLPRPARRIGLSATVRPVDEVARYLSPGRRAEVVQPPSGKEFDLSVVV PVEDMGELGGSPASEPDGAGEKPSIWPQVEERIADLVQAHRSTIVFANSRRLAERLCNRL NEIAYERAVGEPLPDGAPPAEVMAQSGAARGAPPLLARAHHGSVSKEQRALVEEDLKAGR LPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKYRGD LVQAAVVTERMRTGSIESLRVPANPLDVLAQQLVAMVALDTWQFDDLLAVVRRAAPFASL PESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTVTGRPGAQRLAVTSGGTIPDRGLF GVFLAGADPRKGGGRVGELDEEMVYESRVGDVFTLGTTSWRIEDITRDRVLVSPAPGVPG RLPFWKGDQLGRPLELGRAVGAFLREIGSLSEEDARLRLMTAGLDGWAAGNVLSYLDEQR RACGHVPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARLSERYGVDAQVMH ADDGIVLRLPDADLMGLDLLDQDPVHLDTSYDGDQAPVGAGDTLFDKGEIGQIVTDQVGG SALFASRFRECAARALLLPRRNPGKRTPLWQQRQRAAQLLQVASEFGSFPIVLEAVRECL QDVFDVPGLEELMGDIESRRVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAERRAA ALSLDSRLLAELLGQAELRELLDADVLGGLERELQWLTDDRRVKDVEGVADLLRVLGPLT TGELTERGADPGWPEELAGTRRAIRVRIAGAEHWAAVEDAGRLRDALGTALPVGVPEAFT EPVKDPLGDLLARFARTHGPFTSSQAAARFGLGAAVTDGALQRLAAAGRVVQGEFHPSGI GQEWCDAAVLRRLRRRSLAALREELEPVPPAALAAFLPQWQHVGGGSLRGIDGLARAVEQ LQGAPVPASALEKLILPSRVAGYAPGMLDELTTTGEVVWAGAGALPGKDGWVSLYHADAA PLLLPRPHPLELTALHESVLRTLAGGYGLFFRHIADQVRATTHPEITDPQLADALWELAW SGRLTNDTLAPLRSLLGSGRTAGSTAHRARRTVPRGRYGSLTAAARTASRNGPPTVSGRW SLPPAHEPDPTHRAHALARTLLDRHGVVTRGAVAAEGVEGGFSATYRVLSAFEDSGQARR GYVVEGLGAAQFAMDGAVDRLRAAAGARERAGGPTAARALVLAAADPANAYGAALSWPEP PVGASHKPGRKAGSLVVLVDGELTLYLERGGKTLLSWPSEPDDPALRAAAGALAEAGAAG MLGTITIERINSSAALTSPLSPLLEESGFHATPRGLRIRA NT seq 4623 nt NT seq  +upstreamnt  +downstreamnt atggtcggcagtgcactcgacaccttcgcccccgcgacccgcggctggttcaccggggcc ttcagcgcgcccaccgcggcccaggagggcgcctggcgggcgatcggccgcggctccgac gtgctggtcgtcgccccgaccggctccgggaagacgctcgccgcgtttttggccgccctc gacggcctgacgtccgccccgcccccggcggagaccgggaagcgctgccgggtgctgtac gtgtcgccgctgaaggccctcgcggtcgacgtggagcgcaatctccgcagcccgctgacc ggtatccggcaggaggcggtgcggctcggactgccggagcccgaggtgcgcgtcggcatc cggtccggggacacccccgcggccgagcggcgggcgctggcgactcgtccgcccgacatc ctgatcaccactcccgagtcgctgttcctgatgctcacctcgtccgcccgcgaggcgctg ggcggcgtcgagacggtgatcgtcgacgaggtgcacgcggtcgcgggcaccaagcgcggc gcacacctggcgctgtccctcgagcggctggacgagctgctgccccggccggcccgcagg atcggcctctcggcgaccgtccggccggtggacgaggtggcgcgctacctgtcgccgggg cggcgggcggaggtcgtccagccgccctccggcaaggagttcgacctctccgtcgtcgtc ccggtcgaggacatgggcgagctcgggggctctccggcctccgagccggacggcgccggc gagaagccgtcgatctggccgcaggtggaggagcgcatcgccgatctggtgcaggcccac cgctcgacgatcgtcttcgcgaactcccgccgtctcgcggagcggctctgcaaccggctc aacgagatcgcctacgagcgcgccgtgggggagccccttcccgacggcgccccacccgcg gaggtcatggctcagtccggggcggcgcggggcgcgcccccgctgctcgcccgcgcgcac cacggctccgtctccaaggagcagcgcgctctcgtcgaggaggacctgaaggcgggcagg ctgcccgccgtcgtcgcgacgtccagtctggagctgggcatcgacatgggcgcggtggac ctggtcgtccaggtcgagtccccgccgtcggtcgcctccggcctgcagcgcgtcggccgc gccggacaccaggtgggcgcggtgtccacgggtgtcgtgttccccaagtaccggggggat ctggtccaggcggccgtcgtcaccgagcggatgcgcaccggctcgatcgaatcactccgt gtccccgccaatccgctggacgtgctggcccagcagctcgtcgccatggtcgccctcgac acctggcagttcgacgacctgctggcggtcgtgcgccgcgccgcgcccttcgcctcgctc cccgagtcggcgttcacggccgtgctggacatgctggcgggccggtacccgtccgacgcc ttcgccgagctgcgcccgcgggtggtgtgggaccgggtcgccgggacggtcacggggcgc cccggcgcccagcggctcgcggtcacctcgggcggcacgatcccggaccgcgggctgttc ggcgtcttcctggccggtgcggacccccggaagggcggcggccgggtcggcgaactcgac gaggagatggtctacgagtcccgggtcggtgacgtcttcaccctgggcaccacctcatgg cggatcgaggacatcacccgcgaccgggtgctcgtctcccccgcgcccggggtccccggc cggctgcccttctggaagggcgaccagctgggccgcccactcgagctgggcagggcggtg ggcgccttcctccgcgagatcgggtcgctgtccgaggaggacgcccggctgcggctgatg acggccggcctcgacggctgggcggccgggaacgtgctgtcgtacctcgacgagcagcgc agggcctgcgggcatgtgcccgacgaccgcaccatcgtcgtcgagcggttccgtgacgag ctgggcgactggcgggtcgtggtgcactcgccgttcggtgcccaggtccacgccccctgg gcactcgcgctgggcgcgcgcctctccgagcggtacggcgtggacgcccaggtcatgcac gcggacgacggaatcgtgctgcggctccccgacgccgacctgatgggcctcgacctgctg gaccaggacccggtacacctcgacacctcgtacgacggcgaccaggccccggtcggcgcc ggcgacaccctgttcgacaagggcgagatcggtcagatcgtcaccgaccaggtcggcgga tccgccctgttcgcgtcccggttccgcgagtgcgcggcccgcgccctgctgctgccgcgc cggaaccccggcaagcgcaccccgctgtggcagcagcgtcagcgcgcggcccagctgctc caggtcgccagtgagttcggctcgttcccgatcgtcctggaggccgtacgggagtgcctc caggacgtcttcgacgtccccgggctcgaggagctgatgggcgacatcgagtcgcgccgg gtgcggctcgtcgaggtcaccacccccgagccgtcccccttcgcacgctccctcctgttc ggctatgtggcccagttcctctacgagggggattcgccgctcgccgagcgccgggccgcc gccctctcgctggactcccggctgctcgccgaactcctcggccaggcggaactgcgcgaa ctgctcgacgcggacgtcctgggcgggctggagcgggagctccagtggctcacggacgac cgcagggtcaaggacgtggagggcgtcgccgacctgctgcgggtcctcgggccgctgacc accggggagctgaccgagcgcggggccgaccccggctggccggaggagctcgccggtacc cgccgcgccatccgggtccggatcgccggtgcggagcactgggcggcggtggaggacgcg ggacgcctcagggacgcgctgggcacggcgctgccggtgggcgtccccgaggcgttcacg gagccggtgaaggacccgctcggtgatctgctggcccgtttcgcccgcacacacgggccc ttcacctcgtcgcaggcggccgcgcggttcgggctgggcgcggccgtgacggacggggca ctgcaacggctcgccgcggccgggcgggtcgtccagggcgagttccatccgtcgggcatc ggccaggagtggtgcgacgccgccgtgctgcgccggctgcggcgccgctccctcgccgcg ctccgcgaggagctggaaccggtgccgcccgccgcgctggccgccttcctcccccagtgg cagcatgtgggcggcggcagcctgcgcgggatcgacgggctggcccgtgccgtggagcaa ctccagggcgcccccgtgcccgcctccgcgctggagaagctgatcctcccgtcccgggtg gccggatacgcaccgggcatgctggacgagctgaccacgaccggcgaggtggtgtgggcc ggagccggggcgctgccgggcaaggacggctgggtctcgctctaccacgcggacgccgcc ccgctcctgctgccgcggccccacccgctggagctgacggccctccacgagtcggtgctc cgcaccctcgcggggggctacggcctgttcttccgccacatcgcggaccaggtgcgggcg acgacgcacccggagatcaccgacccccagctcgccgacgcgctgtgggagctggcctgg tccgggcggctgaccaacgacaccctggcgccgctgcgctcgctcctgggttccggacgg acggcggggtccaccgcgcaccgtgcccggcgcacggtcccgcgtgggcggtacggctcc ttgacggctgccgcgcggaccgcgtcccgcaacggtccgccgaccgtctccggacgctgg tccctgccgcccgcgcacgagcccgaccccacgcaccgcgcccacgccctggcccgcacg ttgctcgaccggcatggcgtcgtcaccaggggcgcggtcgccgccgaaggcgtcgagggc ggcttctcggcgacataccgcgtcctctccgccttcgaggacagcggacaggcccggcgg ggctatgtcgtcgaggggctcggagccgcccagttcgcgatggacggcgcggtggaccgg ctgcgggccgccgccggcgcccgcgagcgcgccggcgggcccaccgcagcgcgtgcgctg gtgctggccgccgccgacccggcgaacgcctacggggcggcgctgtcctggcccgagccg ccggtcggcgcgagccacaaaccgggccgcaaggcggggtcactggtcgtgctggtcgac ggggaactcacgctgtacctggagcggggcggcaagaccttgctgtcctggccctccgaa ccggacgaccccgcgctccgtgccgccgccggggctctggccgaggcgggcgcggcgggc atgctcggcacgatcacgatcgagcggatcaacagttcggcggctctgacctctccgctc tcccccctgctggaggagtccggtttccacgccacgccacgcggcctgcgcatacgggcc tga

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