Streptomyces spongiicola: DDQ41_24560
Help
Entry
DDQ41_24560 CDS
T06937
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspo03032
]
DDQ41_24560
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_24560
Enzymes [BR:
sspo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DDQ41_24560
DNA replication proteins [BR:
sspo03032
]
Prokaryotic type
DNA Topoisomerases
DDQ41_24560
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DDQ41_24560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SH3_HelY
FliT
SelB_WH2
Motif
Other DBs
NCBI-ProteinID:
AWK11555
UniProt:
A0A2S1Z5D0
LinkDB
All DBs
Position
complement(5619438..5621885)
Genome browser
AA seq
815 aa
AA seq
DB search
MARRSTKTPPPDDFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGMKPVHRRIVY
QMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRLPLVDGHGNFG
SLGNDDPPAAMRYTECRMADATSLMTESIDEDTVDFAPNYDGQEREPLALPAAYPNLLVN
GASGIAVGMATNMPPHNLGEVIAAARHLIRHPGADLETLMRHVPGPDLPTGGRIVGLAGI
RDAYETGRGTFKIRATVSVETVTARRKGLVVTELPFSVGPEKVISKIKDMVGQKKLQGIA
DVKDLTDREHGLRLVIEVKNGFIPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLRE
LLEVYLDHRFDVVRRRSEFRRGKRRDRLHLVEGLLVALVDIDEVIRLIRSSENAAQAKER
LMERFSLSDVQTQYILDTPLRRLTRFDRIELEAERDRLKDEIAALTKILESDAELRKLVS
TELAAVAKKFGTPRRTVLLESGGTPAPAASLQVADDPCRVLLSSTGLLARTVTAEPPPRA
GKRAKHDVVVSSVAATARGEVGVVTSAGRLLRLSVIDLPQLPDSAQAPNLSGGAQVSEFL
SLEADETVVCLTGLAESSPGLALGTLQGVVKRVVPDYPANKDELEVIALKEGDRIVGGTE
LRTGEEDLVFITSDAQLLRFQASQVRPQGRPAGGMAGVKLAEGAEVISFTAIDPAAEAVV
FTVTGAAGTLDDSVATAKLTPFDQYPRKGRATGGVRCQRFLKGEDRLVFAWAGVSAARAA
QQNGSPAELPEIDPRRDGSGTPLATPVAALAGPVS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagacgccgccgcccgacgacttcgaggagaggatcctcgac
atcgacgtcgtcgacgagatgcagggctccttcctcgagtacgcgtactcggtgatctac
tcccgcgccctgcccgacgcccgggacggcatgaagccggtgcaccgccggatcgtgtac
cagatgaacgagatggggctgcgtcccgaccggggctatgtgaagtgcgcccgggtcgtc
ggcgaggtgatgggaaagctccatccgcacggcgacgcgtcgatctacgacgccctggtg
cgcatggcccagcccttctcgatgcggctgccgctggtcgacggccacggcaacttcggc
tccctgggcaacgacgaccctccggcggcgatgcgctacaccgagtgccggatggccgac
gcgacgagcctgatgaccgagtccatcgacgaggacacggtcgacttcgcccccaactac
gacgggcaggagcgggaaccgctggcgctgccggcggcgtacccgaacctgctggtgaac
ggcgcgtcgggaatcgcggtcggcatggcgaccaacatgccgccgcacaacctcggcgag
gtgatcgccgccgcccgccatctcatcaggcacccgggggcggacctggagacgctgatg
cgccatgtgccgggacccgacctgcccaccggcggccggatcgtgggcctggccgggatc
agggacgcgtacgagaccggccgcggcacgttcaagatccgcgccacggtgtcggtggag
accgtgacggcgcgccgcaagggcctcgtcgtcaccgaactgcccttcagcgtcggcccg
gagaaggtcatctccaagatcaaggacatggtcggccagaagaagctgcagggcatcgcc
gacgtcaaggacctcacggaccgcgagcacgggctgcgcctggtgatcgaggtgaagaac
ggtttcatccccgaggccgtcctggagcagttgtacaagctgacgccgatggaggagtcc
ttcggcatcaacaacgtggcgctggtcgacggccagccgctgacactggggctcagggaa
ctgctcgaggtctatctcgaccaccgcttcgacgtggtgcgccgccgcagcgagttccgc
cgcgggaagcggcgggaccggctccacctggtcgagggcctgctcgtcgcgctggtcgac
atcgacgaggtcatccgcctgatccgttccagcgagaacgcggcgcaggccaaggagcgg
ctgatggagcgcttctccctcagcgacgtccagacgcagtacatcctcgacaccccgctg
cgccggctcaccaggttcgaccggatcgagttggaggccgagcgcgacaggctcaaggac
gagatcgccgcactgacgaagatcctggagtcggacgccgaactgcgcaagctcgtctcg
accgaactggccgcggtggccaagaagttcggcaccccccggcgcaccgtcctgctggag
tccggcggcaccccggccccggccgcctcacttcaggtcgcggacgacccgtgccgggta
ctgctgtcctccacggggctgctcgcccgcacggtcaccgccgagccgccgccgcgggcg
ggcaagcgcgccaagcacgacgtggtcgtctcctcggtggcggccacggcgcgcggcgag
gtgggcgtggtgacctcggcgggccggctgctccggctgtcggtgatcgaccttccgcag
ctccccgactcggcgcaggcgccgaacctctcgggcggcgcgcaggtctcggagttcctg
tcgctggaggcggacgagacggtcgtctgcctgaccggtctggcggagtcctcgccgggt
ctggcactgggcacgctccagggcgtggtcaagcgggtggtgccggactacccggccaac
aaggacgaactcgaggtcatcgcactcaaggagggcgaccggatcgtcggcggcaccgaa
ctgcgcacgggtgaggaggacctggtgttcatcacctccgacgcgcaactgctgcgcttc
caggcctcgcaggtgcgcccgcagggcaggccggcgggcggcatggcgggggtcaagctc
gccgagggagccgaagtgatctcgttcaccgcgatcgacccggccgcggaagcggtggtc
ttcacggtcaccggggccgccgggacactggacgactcggtagcgacggcgaagctgacg
ccgttcgaccagtacccgcgcaagggccgggccaccggcggcgtgcgctgccagcgcttc
ctgaagggcgaggaccggctggtcttcgcctgggcgggggtgagcgcggcgcgcgcggcg
cagcagaacggctccccggccgagctcccggagatcgacccccgccgggacgggtcgggc
accccgctggccacgccggtcgcggccctggcgggaccggtgtcctag
DBGET
integrated database retrieval system
