Streptomyces spongiicola: DDQ41_24805
Help
Entry
DDQ41_24805 CDS
T06937
Name
(GenBank) DEAD/DEAH box helicase
Organism
sspo
Streptomyces spongiicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
DEAD
Helicase_C
MZB
APH
ABC1
Kdo
Kinase-like
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AWK11604
UniProt:
A0A2S1Z5F8
LinkDB
All DBs
Position
complement(5680132..5686521)
Genome browser
AA seq
2129 aa
AA seq
DB search
MAWQDGTGRAGRQASQTERGVAVAERLIGGRFRVTGVIGSGNMGEVHRAEDLHRAEGTAA
RTVAVKTILRRRSGAHLDTADDAKAVQRFAREVRIMRRLEHPNLTRLVDGGVDEADGRPY
LVMEYLDGETLRDLIEEERQLPAAWAVAIGAQIAAGLAAAHAAGVVHRDLKPANTMLTTG
GTVKVLDFGMGRIVDDPADARLTSTGVSVGTARYMAPEQFEARQVTQAADLYALGCVLYE
MLAGVPPFVSGSAYELGRKHVEEIPASVSTVRPATPAALARLVNRLLAKDPAERPADAVS
VREALLPLLPEAFAADGTDPGEEGSALPHWSALDPVRPVRRAAPAAAVPPAAPAAERPRR
APSGPGMDVFGVHRTLIEDYRSFTEGGTVIRDDRIASFVEDDLNAKSQWPDPWLSLNPFF
ASGGTVVELAGQGVLHPECARIFQARKTQGGTVCDGRPLTLHQHQREAVDAAASGESYVL
TTGTGSGKSLSYIVPIVDRVLREREAAGHRAAKRVRAIVVYPMNALANSQLKELEKYLRD
GYGAGREPVTFARYTGQEDDRRRREIRDNPPDILLTNYVMLELMLTRPADRASLISMARG
LEFLVFDELHTYRGRQGADVALLIRRVREACRADRLQCVGTSATMSTEGTADDRRRVVAD
TATTLFGTPVHPRNVIVETLVRATDEAPATVPADRLRAPGAPRAYTDLVRDPLARWIETR
FGLAVDGGRLVRQRPAQIEVAARELAGASGVDAQQCRVAIEATLEAGSEARHPVTERPLF
AFRLHQFLSKGDTVYATLEDRLTRHLTRSYQLEQPGGGGKLLMPLAFCRECGQDYLTVWR
TEKDGEVRYEARRDTAATGGRQGDGYLYVDHDRPWPSAVQYAVDDRRLPESWLEADDRGQ
EVVRKSYRDRVPRAVTVDPRGVEGRDGLRAAFVPSPFLFCLHCGVAYEQTRGKDFAKLAT
LDREGRSSATSLISASVVRSLKSVPEEALEKEARKLLTFVDNRQDASLQAGHFNDFVQIT
QLRGALYRAALDAGEDGLHHEDLAARVGDALGLHPADYTDGGRTPAPAMARAAARTLRDV
IAFRLYLDLERGWRITMPNLEQTGLLEIDYADLDWVAAEEDPWATALPVLREADPTLRAE
IMRALLNEMRRSLAIDVSYFRDDFDALQRASEERLADPWVLSASDRPRVGTAYPHPSGKG
MDRSALFLSARGKFGKYLGRADRSFGELDTDALQQVIAQLLKVLAEAGLVKEVTEAPQRA
GRFRRPADSAATGYRVAAQCLVWRAGMGETGTHDPLTRTYQSGDGPRVNTFFRDLYKEAA
GALAGLFAREHTAQVSPEEREKRENAFREAELKLLYCSPTMELGVDISSLNAVMMRNVPP
TPANYAQRSGRAGRSGQPALVTTYCATGNSHDQYYFRRSERMVAGAVAPPRLDLANEDLV
RSHLQGIWIAETGLKLGRAMSDVLDVPAPDSGDRLTPDLELQPDIREGSLDEAARRRTVD
GARRVLAPLLPDFADTTWWYDEWIEDQVRTVPGRFDQAFERWRKLFRSALRDYYIQSERR
IDYSLTEGDRKRANTRQREAWTQLNLLMNESADSKSVLSDFNPYRYLASEGFLPGYSFPR
LPLAAYIPTVGRSRGDGDFLQRPRFLAIREFGPGALIYHEGARYQVTRIQLPPDSSGDLA
TSEARRCAQCGYHHDPKDRDDRCRMCDEPLGSSTYGLLHLHTVYTTRRERISSDEEERRR
AGFRLETSFRFHDHGTRSGRLNASVTDTAGAPVAELAYGDSATVRITNTGRVRAKSDEPP
GYWLDLADGRWMNDADAAQASGDSGELPVIDEAGNERRRKKRVIPFVEDRRNILVLTLDE
ALPEPVALSVMYALERGIEAAFELEDAELTSELLPPNDGPRRRLLFTEAAEGGAGVLRRL
QAEKHALAEAAREALSICHFGAEGEDLGGPHPDRPCALGCYECLLTYGNQLSHALLNRHT
ARDLLVRLASASATRDPRGESRSEQFRRLLDGSSGTPTRVEDAVAESLGKPAQDDLLTWL
RARGLRLPDEAEKLVTEANALVDFVYRLPGAKVAVFVDLPGVETTALRDEDAEERLQDAG
WDVIRFPHDTDWDEIVRPHSRYFGTPAAD
NT seq
6390 nt
NT seq
+upstream
nt +downstream
nt
atggcatggcaggacgggacggggcgggccgggcgtcaggccagccagacggagagaggg
gtggcagtggccgagcggctgatcgggggccggttccgggtgacgggggtcatcgggtcc
gggaacatgggcgaggtccaccgcgccgaggacctgcaccgggcggagggcacggcggct
cgcaccgtcgccgtgaagaccatcctccggcgccggtccggcgcccatctggacaccgct
gacgacgccaaggccgtccagcggttcgcccgtgaggtccgcatcatgcgccgcctggag
caccccaacctcactcgcctcgtcgacggaggcgtggacgaggcggacggccgcccctac
ctggtgatggagtacctggacggcgagaccctgcgcgacctgatcgaggaggagcggcag
ctccccgcggcctgggccgtcgccatcggcgcgcagatcgccgccggtctggccgccgcg
cacgcggccggggtggtccaccgggatctgaagccggccaacaccatgctgaccacgggc
ggcacggtgaaggtgctcgacttcggcatgggccggatcgtggacgaccccgcggacgcg
aggctcaccagcacgggggtgagcgtcggcaccgcccgctacatggcgcccgagcagttc
gaggcccgccaggtcacccaggcggccgacctgtacgccctcggctgcgtcctgtacgag
atgctggccggcgtgcctccgttcgtcagcggatcggcctacgagctgggccgcaagcac
gtcgaggagatcccggcgtccgtgagcaccgtacggcccgccacccccgcggccctggcc
cggctggtgaaccggctgctggccaaggaccccgccgaacgccccgccgacgcggtgtcc
gtccgcgaggccctgctcccgctgctcccggaggcgttcgcggccgacgggacggacccc
ggcgaggagggttccgcgctcccccactggagcgcgctcgacccggtccgccccgtacgc
cgcgccgccccggccgcggcggtgccgcccgcggcgccggccgccgagcgcccccgccgg
gctccctccggtcccggcatggacgtcttcggtgtccaccgcaccctgatcgaggactac
cgctccttcaccgagggcggcacggtcatccgcgacgaccgcatcgcctcgttcgtcgag
gacgacctgaacgccaagtcccagtggcccgacccgtggctgtccctcaacccgttcttc
gcgagcggcggtacggtcgtcgagctggcggggcagggcgtgctgcaccccgagtgcgca
cggatcttccaggcccgcaagacccagggcggcacggtgtgcgacggccgcccgctcacc
ctccaccagcaccagcgcgaggccgtcgacgccgccgcttccggcgagtcgtatgtgctg
acgaccggcaccggctccggcaagtcgctctcctacatcgtgcccatcgtggaccgggtc
ctgcgcgagcgcgaggcagcgggccaccgggcggcgaagcgggtgcgcgcgatcgtcgtc
tacccgatgaacgcgctcgcgaacagccagctgaaggagctggagaagtacctgcgcgac
gggtacggggccggccgcgagcccgtcaccttcgcccgctacaccggccaggaggacgac
cggcgccgcagggagatccgcgacaacccgccggacatcctgctcaccaactacgtgatg
ctggagctgatgctgacccgcccggccgatcgcgccagcctcatcagcatggcccgcggc
ctggagttcctcgtcttcgacgaactgcacacctaccgcggccggcagggcgcggacgtc
gccctgctgatccgacgggtccgcgaggcctgccgggccgaccggctccagtgcgtcggc
acgtccgccaccatgtccaccgaaggaaccgcggacgaccggcgccgggtggtcgcggac
accgcgaccaccctgttcggcacgcccgtgcatccccgcaatgtcatcgtcgagacgctg
gtccgggccaccgacgaggcgccggcgaccgtcccggcggaccggctgcgcgcgcccggc
gccccccgcgcgtacaccgacctggtgcgcgatccgctggcccggtggatcgagacccgg
ttcggcctggccgtggacggcggccggctggtgcggcagcggccggcccagatcgaggtc
gcggcccgggagctggccggcgcctccggcgtggacgcccagcagtgccgggtggccatc
gaggcgacgctggaggccggctcggaggcccgccacccggtcaccgagcggccgctgttc
gcgttccggctgcaccagttcctgtccaagggcgacaccgtgtacgccacgctggaggac
cggctcacccgccacctcacacgctcgtaccagctcgaacagcccggcggcggcggcaag
ctgctgatgccgctggcgttctgccgcgagtgcggccaggactacctgaccgtctggcgt
accgagaaggacggcgaggtgcgctacgaggcccgccgggacaccgccgcgaccggcggc
cggcagggcgacggctatctgtacgtcgaccacgaccggccctggccgtccgccgtccag
tacgccgtcgacgaccgccggctgccggagtcctggctggaggcggacgaccgcggccag
gaagtcgtcaggaagtcctaccgcgaccgggtgccgcgggccgtcaccgtcgacccgcgc
ggcgtcgagggccgggacgggctgcgggccgcgttcgtcccgtccccgttcctgttctgc
ctgcactgcggtgtggcgtacgagcagacccgcggcaaggacttcgccaagctggccacg
ctcgaccgggaaggccgttcctcggccacctcgctgatctccgcctcggtggtccggtcg
ctgaagtccgttcccgaggaggccctggagaaggaggcacgcaagctcctcaccttcgtc
gacaaccgccaggacgcctcgctccaggccggccacttcaacgacttcgtgcagatcacc
caactgcgtggggcgctgtaccgggcggctctggacgccggcgaggacggcctgcaccac
gaggacctggcggcccgggtcggggacgcgctcggcctgcacccggcggactacaccgac
ggcggccgcacgccggccccggccatggcccgtgccgcggccaggaccctccgcgacgtg
atcgcgttccggctctacctggacctggagcggggctggcgcatcaccatgcccaacctg
gagcagaccgggctgctggagatcgactacgcggacctcgactgggtggcggcggaggaa
gacccctgggccaccgccctcccggtgctgcgcgaggccgatccgacactgcgcgccgag
atcatgagggcgctgctgaacgagatgcgccggtcgctcgccatcgacgtgtcctacttc
cgggacgacttcgacgcgctccagcgggcgagcgaggagcggctcgccgacccgtgggtg
ctgtccgcctcggaccggcccagggtcggcaccgcctacccgcacccctcgggcaagggc
atggaccgctcggcgctgttcctctccgcccggggcaagttcggcaagtacctcggccgg
gcggaccggtcgttcggggagctggacaccgacgcgctgcagcaggtcatcgcccagctg
ctcaaggtcctcgcggaggccggactggtcaaggaggtgaccgaggcgccccagcgcgcc
gggcggttccgcaggccggcggactccgcggcgaccggctaccgggtcgccgcccagtgc
ctggtctggcgtgccggaatgggcgagaccggcacccacgacccgctgacccgcacctat
cagagcggtgacggccctcgtgtgaacaccttcttccgcgacctctacaaggaggccgcg
ggggcgctggccggcctgttcgccagggagcacaccgcacaggtgtcccccgaggagagg
gagaagcgcgagaacgccttccgcgaggccgaactgaagctcctgtactgctctccgacg
atggagctgggcgtcgacatctcctcgctgaacgcggtcatgatgcgcaatgtgccgccc
acccccgccaactacgcgcagcggtcgggccgggctggccgcagcggccagcccgccctg
gtcaccacctactgcgccaccggcaacagccacgaccagtactacttccgccgttccgag
cggatggtggcgggcgcggtcgccccgccccgtctcgacctggccaacgaggacctggtc
cgctcgcacctccagggcatctggatcgcggagaccggcctgaagctgggccgggccatg
tccgacgtcctcgacgtgccggcgcccgacagcggcgaccgcctcacccccgacctggag
ctgcagcccgacatccgcgagggctccctcgacgaggcggcgaggcgccgcaccgtggac
ggggcacggcgcgtcctcgcaccgctgctgcccgacttcgcggacaccacctggtggtac
gacgagtggatcgaggaccaggtccgtaccgtccccgggcgtttcgaccaggcattcgaa
cggtggcgcaagttgttccgctccgcgctcagggactactacatccagagcgagcgccgg
atcgactacagcctcaccgaaggcgaccgcaagcgggccaacacccgccagcgcgaggcg
tggacccagctgaacctgctgatgaacgagagcgccgacagcaagtcggtcctctcggac
ttcaacccgtaccgctacctcgcctccgagggcttcctgcccggctacagcttcccccgg
ctgccgctcgccgcctacatcccgaccgtcggccgctcccgcggcgacggcgacttcctc
cagcggccccgcttcctcgccatccgcgagttcggtcccggcgcgctgatctaccacgag
ggcgcccgctaccaggtcacccggatccagctgccgccggactcctccggtgacctggcc
accagcgaggcccgccgctgcgcccagtgcggctaccaccacgacccgaaggaccgggac
gaccgctgccggatgtgcgacgaaccgctcggctcgtcgacgtacggactgctgcacctg
cacaccgtgtacaccacgcggcgggagcggatctcctcggacgaggaggagcggcgccgg
gcgggcttcaggctggagacgtccttccgcttccatgaccacggcacccgcagcggccgg
ctgaacgcctccgtcaccgacaccgcgggcgcgccggtcgccgagctggcgtacggcgac
tcggcgaccgtccgcatcaccaacacgggccgggtccgggccaagagcgacgagccgccg
ggctactggctggacctggccgacggccgctggatgaacgacgcggacgcggcacaggcg
tcgggcgactccggcgaactgccggtgatcgacgaggccggcaacgagcggcgccgcaag
aagcgcgtcatcccgttcgtcgaggaccgccgcaacatcctcgtcctcaccctcgacgag
gccctgcccgaaccggtcgccctgtccgtcatgtacgccctggaacggggcatcgaggcg
gccttcgagctggaggacgcggagctcaccagcgagctgctgcccccgaacgacggcccg
cgccggcgcctgctgttcacggaggccgccgagggcggcgccggtgtgctgcgccgcctc
caggcggagaagcacgcgctggccgaggcggcccgggaggccctgtccatctgccacttc
ggcgcggaaggcgaggacctgggcggcccccaccccgaccggccgtgcgcgctcggctgc
tacgaatgcctgctcacctacggcaaccagctcagccacgccctgctcaaccggcacacg
gcgcgggacctgctggtccggctggcgtcggcgtcggccacccgcgacccgcgcggcgag
tcccggtccgagcagttccggcgcctgctggacgggagttccgggactcccacccgggtg
gaagacgcggtcgcggagagcctgggcaagccggcccaggacgatctcctcacctggctc
agggcccggggcctgcgcctgcccgacgaggccgagaaactggtcaccgaggccaacgcc
ctggtggacttcgtctaccgcctccccggggcgaaggtcgccgtcttcgtcgacctcccg
ggcgtggagacgacggctctgcgcgacgaggacgcggaggaacgcctccaggacgccggc
tgggacgtcatccgcttcccgcacgacaccgactgggacgagatcgtccgcccgcactcc
cgctacttcggcacgcccgccgccgactga
DBGET
integrated database retrieval system