Streptomyces spongiicola: DDQ41_24810 Help Entry DDQ41_24810       CDS       T06937                                  Name (GenBank) hypothetical protein   KO K03086   RNA polymerase primary sigma factor Organism sspo  Streptomyces spongiicola Pathway sspo02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:sspo00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     DDQ41_24810  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:sspo03021]     DDQ41_24810 Transcription machinery [BR:sspo03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      DDQ41_24810 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_r2 Sigma70_r4 Sigma70_r3 Exog_C Motif Other DBs NCBI-ProteinID:  AWK11605 UniProt:  A0ABM6VC84 LinkDB All DBs Position 5686725..5689925 Genome browser AA seq 1066 aa AA seqDB search MKAEGRGERSAAELRAALRELYGELMRAAVSGVVSERQFLLSVDRLGLVQGEQDRLRDEL ARLGLGVRGEAEHISKDRRDTRKVAPQPQPSPAAGRVDLAHGLLGRYQGGRGSVGAETVA GVARLCGLTPEEERTLRARVSPRPPARTAAGSVVPGPRDEAAVRPAPSVPLSEVSVPTAG PEDADGPEDAEDAEDAEPFLPAVSPPAVGDVSRAVEAARALLDESRFIRRPESRLLSAAE EVGLGALVRGGAEGIGRPVTEAEIAALPATDIRVRARNCFVVHNQRLVRSIVPKYLEQGL DYEDLFQHGARALMRAAVKFDPTQGYKFSTYATWWIRQGLTRAVADEGAVIRIPVHMHEK MRKVAMTERTLQSQGRPARPADLAVVCDMPVHRVEGILLLSRRTDSLDRIVADGAHLGDL VALDRPLPSAERLAMEQMHRAYLLSFLERFGEREARILLRRTGLDDGERSTLEDLGREFD VTRERIRQVEMKAFETLRQMLLEAGFGPGHREPPDPKPRKRATRTQRAARAARAVQTARA ARVARFAHAAGAAQAGQPGTGAESVAGQDPVVRPDATRSEAGPSAGAGAGAGAPQAAPEP VPEPVPAPEPVPEPAPAPEPVPEPAPAAVPAPVSDPAPAAEPVAASASAPPPASPSAPAP AHVAAPAPLQAGLPRGPYAPDWERALAIPVQFSGSVAWLSEYVLLALGHEELAHVLGRPA ADDVVAVLKRRGTLDRPVVAALEVLQKVFDSLKDSGMRPADFLDRSFQALNGVSPRFYLA QRPLVHRESRLAVRDALREFTKEPVAPAASAAATGPAAPEGAATAERPAERPEERPAGTG TEPAAAAGAVAEPERAGVSAGSTVVPSAPVLAAAARGQRPGHTAAEWNAALDAEVERRLD ELEAAYLGRVDRALQRQERSLRREADARSAGLREEAEARLRRERAEHQTQTAALMAGLRE AEERAARAEERARESARQHLSQIGSLEEQLRGARFAVAQREAALREAEDDAGAATEAVER WAAQRIAETETAARDAHRLVAELEAQIAALTTAPERGTPRDMRGRG NT seq 3201 nt NT seq  +upstreamnt  +downstreamnt gtgaaggcagagggccgaggtgaacgcagtgccgccgaactccgggccgcccttcgtgag ctgtacggcgaactgatgcgcgccgccgtgtcgggtgtggtctccgagcggcagttcctc ctgagcgtggacaggctcgggctggtgcagggggagcaggaccgactccgcgacgagctg gcccgcctggggctgggggtccggggggaagcggaacacatcagcaaggaccggcgggac acccggaaggttgcaccgcagccgcagccgtcgccggccgcgggccgggtggacctggca cacggcctcctgggccgctaccagggcggccgggggagcgtgggtgccgagacggtcgcc ggcgtcgcgcgcctgtgcgggctgacgccggaggaggagcggacgctgcgcgccagggtg tcgccccggccgccggcgcggactgccgccggaagcgtcgtacccgggccgagggatgag gctgccgtccggccggcgccgagcgtgccgctgtccgaggtgtccgtgccgacagccggc ccggaggacgcggacggcccggaggacgcggaggacgcggaggacgcggagcccttcctg ccggccgtttcgccgcccgcggtcggtgacgtgagccgggccgtcgaggccgcccgtgcc cttcttgacgagagccgcttcatccggcggccggagagccgtcttctgtcggcagccgaa gaggtgggactcggagcgctggtacggggtggagcagaggggatcggccggccggtgacg gaggcggagatcgccgcgctgcccgccaccgacatccgggtcagggcgcggaactgcttc gtcgtccacaaccagcggctggtccgcagcatcgttcccaagtacctggagcaggggctc gactacgaggacctgttccagcacggggcccgggccctgatgagggcggcggtgaagttc gacccgacccagggctacaagttctccacgtacgccacctggtggatccggcagggactc acccgggccgtcgccgacgaaggggccgtcatccgcatccccgtccacatgcacgagaag atgcgcaaggtcgccatgaccgagcggacgctccagtcgcagggccggcccgcgcgcccg gccgacctggccgtggtgtgcgacatgcccgtgcaccgcgtggaggggatcctgctgctg agccgccgcacggactccctggaccggatcgtcgcggatggcgcccacctgggcgacctc gtcgcccttgaccgtccgctgccctcggccgagcggctggccatggagcagatgcaccgt gcgtacctgctgtcattcctggaacggttcggcgagcgggaggccaggatcctgctgcgc cggacagggctggacgacggggagcggtcgaccctggaggacctgggcagggagttcgac gtcacgcgtgagcgcatccgccaggtggaaatgaaggcgttcgagacgctgcggcagatg ctgctggaggccggcttcggtcccgggcacagggagccgcccgacccgaagccgcgcaag cgcgccacgcgcacgcagcgggcggcccgtgccgcccgcgctgtccagacggcccgtgcc gcccgcgtggcccgattcgcccacgctgccggtgccgcccaggccgggcagccgggtacc ggggccgaatccgtcgccgggcaggacccggtggtgcggccggatgccacacggtcggag gctgggccgagcgcgggtgcgggtgcgggtgctggtgcgccgcaggctgcgcccgagccc gttcccgagcccgttcccgcgcccgagcccgttcccgagcccgcgcccgcgcccgagcct gttcccgagcccgcgccggcggccgtgcccgcgccggtgtccgaccctgctcccgcggcc gagccggtggccgcgtctgcgtcggctcccccacctgcttccccgagcgcgcccgctccg gctcacgtggccgctcccgctcccctccaggccggcttaccgcgagggccgtacgctcct gactgggagcgggcgctggccatcccggtgcagttctccgggagcgtggcctggctctcc gagtacgtgttgctggccctcggccacgaggaactggcccacgtgctggggcggcccgcg gccgacgacgtggtggcggtgctgaaacggcggggcacgctggaccgtcccgtggtcgcc gccctcgaagtgctgcagaaggtgttcgactcgctcaaggactccggcatgcgccctgcg gacttcctcgaccggtccttccaggcgctgaatggggtgtcgccgaggttctacctggcc caacgccccctggtccaccgggaatcccgcctcgccgtccgcgatgccctgcgtgagttc acgaaggagccggtggccccggcggcgtccgccgccgcgaccggtccggccgccccggag ggagccgccacggcggagaggcctgcggagaggcctgaggagaggcctgcggggaccggg acagagcccgcagcggcggccggggcggtggcggaaccggagcgggcaggcgtatccgcg ggaagcacggtagtcccttccgctcccgtcctggcggccgcggcgcggggacagcgtccc ggacacactgccgcggagtggaacgcggccctggacgccgaggtcgagcgccggctcgac gagctggaggccgcgtacctcgggcgggtcgaccgggccctgcaacggcaggaacggtca ctgcgcagggaggccgacgcccgctcggccgggctccgcgaagaagccgaagcccggctg cggcgcgagcgcgcggagcatcagacgcagaccgccgcgctcatggcgggactgcgggag gccgaggagcgtgccgcacgggccgaagagcgggcgcgggaatccgccaggcagcacctg tcacagatcggctccttggaggagcagctccggggggcgcgattcgcggtcgcccagcgg gaggcggcactgcgggaggccgaggacgacgcaggcgccgcgaccgaggccgtagagcgt tgggcggcgcagcgcatcgcggagaccgaaaccgccgcgcgtgacgcccaccgactggtc gccgaactggaagcccagatcgcggccctcaccacggcgcccgagcgcgggaccccgcgc gacatgcggggccgcggctga

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