Streptomyces spongiicola: DDQ41_26780
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Entry
DDQ41_26780 CDS
T06937
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_26780
Enzymes [BR:
sspo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
DDQ41_26780
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
DDQ41_26780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AWK11930
LinkDB
All DBs
Position
6145681..6147195
Genome browser
AA seq
504 aa
AA seq
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MSRRAPRTHLVFGDQLGPHFTEPGADGPDEDAPILMIESRAVFRRRSFHRAKAHLVLSAM
RHRAAELGDRVRYVKAGTYREGLARAAGGTRTTVCHPTSHAAARLVAALPDVDAVPARGF
LVPHEDFAAWAAERGGPLRLEDFYRWVRRRHELLMDGGEPAGGRWNFDRENREPPPRGRS
TLGVPPPWTAREDEIDEEVRHDLDAWERAGDVSFTGRDGPRLFPASRAEALAALARFAEH
RLASFGRYEDAVLADDPWMSHSMLSAPLNLGLLDPAECVERAERAWREGGVPVASAEGFV
RQIAGWREYVWHLYWHFGEDYRRRNVLRHRRSLPDWFADLDADAVTARCLSTVLAQVRDT
GWTHHIPRLMVLGSRALQEGWDPAQVTDWFHRNFVDGYDWVMLPNVVGMSQYADGGRMTT
KPYTSGGAYINRMSDLCGGCAYRPTERVGDRACPYTAGYWAFLHRHRERLSRNHRMARTV
AGLDRLADLPELLEQERRRGRSAP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcgcaccccgtacgcacctggtcttcggggaccagctcggaccgcacttc
accgagccgggagccgacggccccgacgaggacgcccccatcctcatgatcgagtcccgt
gccgtgttccgccggaggagcttccaccgggccaaggcccatctggtgctctcggccatg
cgccaccgcgccgccgaactcggcgaccgggtgcggtacgtgaaggccggcacctaccgg
gagggcctggcacgagccgcgggcggcacccgtaccacggtctgccacccgacctcccac
gcggccgcgcgcctcgtcgccgccttgccggacgtcgacgccgtccccgcgcgagggttc
ctcgtgccgcacgaggacttcgccgcctgggccgcggaacgcggcgggcccctgcggctg
gaggacttctaccgctgggtgcgccgtcgccacgagttgctgatggacggcggcgaaccg
gcgggcggccgctggaacttcgaccgcgagaaccgagaacccccgccgcggggccggtcg
accctcggcgtgccgccgccgtggacggcacgggaggacgagatcgacgaagaggtacgg
cacgacctggacgcctgggagcgcgcgggcgacgtctccttcacgggccgcgacgggccc
cggctcttccccgcctcccgcgccgaggccctggccgcccttgcccgcttcgccgagcac
cggctggcctccttcggcaggtacgaggacgccgtgctcgccgacgacccctggatgagc
cacagcatgctgtccgcaccgctcaacctggggctgctcgaccccgccgagtgcgtggag
cgcgccgaacgggcctggcgcgagggcggggtaccggtggcgtcggcagagggcttcgtc
cggcagatcgccggctggcgggagtacgtctggcacctctactggcacttcggcgaggac
taccggcgccgcaacgtgctgcgccaccgccgctccctgccggactggttcgcggacctg
gacgcggacgcggtcaccgcgcgctgcctgtccaccgtgctggcccaggtcagggacacc
ggatggacccaccacatcccgcggctgatggtcctcggcagccgcgccctgcaggaagga
tgggatccggcgcaggtcaccgactggttccaccgcaacttcgtcgacggctacgactgg
gtcatgcttccgaacgtcgtcgggatgtcccagtacgccgacggcgggcggatgaccacc
aagccgtacacctcgggcggtgcctacatcaaccggatgagcgacctgtgcggcggctgc
gcctatcggcccaccgagcgggtcggcgaccgggcctgcccgtacaccgcgggctactgg
gcgttcctccaccggcaccgggagcggctctcccgcaaccaccgcatggcccggaccgtg
gccggcctcgaccggctcgccgacctccccgaactgctggagcaggagcgccggcgcggg
cggtcggcgccctga
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