Streptomyces spongiicola: DDQ41_26880
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Entry
DDQ41_26880 CDS
T06937
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspo03021
]
DDQ41_26880
Transcription machinery [BR:
sspo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DDQ41_26880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
MarR_2
HTH_37
DUF1492
HTH_3
HTH_Tnp_4
HNF-1_N
MarR
Sigma70_ECF
HTH_10
HTH_31
Topo-V_HhH_2_2nd
GerE
HTH_24
HTH_27
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AWK11945
UniProt:
A0A2S1Z6H1
LinkDB
All DBs
Position
complement(6169471..6170349)
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AA seq
292 aa
AA seq
DB search
MAAVTAVTTAAQETTSAIGGIELAPVADPSKVAPQDARGLSRQFFARLARLEEGTHEYQY
VRNTLIEMNLSLVRYAAGRFRSRGADEMEDIVQVGTIGLIKAIDRFDLSREVEFTTFAVP
CIVGEIKRFFRDTSWAVHVPRRLQEARVELAKATEELRSRLGRTPTVRELSELMSLPEAD
VIEARKASNAYNSASLDAALTGDSAQDGEAALADFIGAEEAALELIEDFHSLAPLVAELE
ERDRRILHLRFVEELTQAQIGEQLGISQMHVSRLLNRIIKRLRTGLLEVGTA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtgaccgcagtgacaaccgcggcgcaggagacgacttcggcgatcggcggg
atcgaactggcgcccgtcgcggacccgtccaaggtggctccccaggatgcacgcggcctg
tcccgtcagttcttcgcccggctggcgcgactcgaggagggcacccacgagtaccagtac
gtacggaacaccctcatcgagatgaacctctcgctggtcaggtatgcggctggccgcttc
cgcagccgtggcgcggacgagatggaggacatcgtccaggtgggcacgatcggcctgatc
aaggccatcgaccgcttcgacctgtcgcgcgaggtggagttcaccaccttcgccgtgccc
tgcatcgtgggtgagatcaagcgcttcttccgggacaccagctgggcggtgcacgtcccc
cgccggctccaggaggcccgtgtcgagctggccaaggccaccgaggagctgcggagcagg
ctcggccggacccccacggtgagggagctctccgagctgatgtcccttcccgaggcggac
gtgatcgaggcccgcaaggcctccaacgcctacaactccgcctcgctggacgccgcgttg
acgggtgacagcgcccaggacggcgaggcggccctcgccgacttcatcggtgcggaggag
gcggcgctcgagctgatcgaggacttccactccctcgctcccctggtcgccgaactcgag
gagcgcgaccgcaggatcctgcacctgcgcttcgtggaggaactcacccaggcgcagatc
ggcgagcagctgggcatctcccagatgcacgtttcacgtctgctgaaccggatcatcaag
cggctgcgcaccgggctgctggaagtcggcaccgcctga
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integrated database retrieval system
