Streptomyces spongiicola: DDQ41_27535
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Entry
DDQ41_27535 CDS
T06937
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DDQ41_27535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspo03000
]
DDQ41_27535
03400 DNA repair and recombination proteins [BR:
sspo03400
]
DDQ41_27535
Enzymes [BR:
sspo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DDQ41_27535
Transcription factors [BR:
sspo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
DDQ41_27535
DNA repair and recombination proteins [BR:
sspo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DDQ41_27535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AWK13167
LinkDB
All DBs
Position
6317680..6319161
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AA seq
493 aa
AA seq
DB search
MHTDTERCVRAVRSRDARFDGWFFTAVLTTRIYCRPSCPAVSPRAENMAFYPTAAACQQA
GFRACKRCRPDTSPGSPEWNARADAVARAMRLIQDGVVDREGVTGLAARLGYSTRQIERQ
LLAEVGAGPLALARAQRAQTARILAETTSLPLADVAFAAGFSSIRTFNETVREVFALAPG
ELRNRAATRRGGAPLPTAPGVITLRLPFRAPLNPDNLFGHLAATAVPGVEEWRDGAYRRT
LTLPNGHGIVSLAPRPDHIACRLSLTDHRDLTLAISVCRRMLDLDADPVAVDDQLRTDPL
LAPLVDKAPGRRVPRTADAAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPVQDPEGGLT
HLFPGPGALAAADPERLAFPRSRRTALTTLFGALADGRIRLGPGSDWAEARARLSALPGL
GPWTVEAIAMRALGDPDAFLPTDLGVRHAAAGLGLPPTPAALTARAAAWRPWRAYAVQYL
WATGDHPINRLPV
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgtgtacgggccgtacggtccagggacgcgcggttcgac
gggtggttcttcaccgccgtgctgacgacccgcatctactgccggcccagctgccccgcc
gtttcgccgcgggccgagaacatggccttctaccccaccgcggccgcctgccagcaggcc
gggttccgggcctgcaagcggtgccgcccggacaccagcccgggttcaccggagtggaac
gcccgcgccgacgccgtagcccgtgcgatgcgcctgatccaggacggggtcgtcgaccgg
gagggcgtgaccggcctcgcggcccggctcgggtactcgacccggcagatcgagcggcag
ctcctcgccgaggtcggcgcgggaccgctggcactggcccgggcccaacgggcgcagacc
gcacggatcctcgcggagacgacctcgctgcccctggccgacgtggcgttcgccgcgggc
ttctcctccatccgcaccttcaacgagaccgttcgcgaggtgttcgcgctggccccgggc
gagctgcggaaccgcgccgcgacccggcgcggaggagcgccgctgccgacggcaccgggt
gtcatcacgctgcgccttccgttccgcgcgccgctcaaccccgacaacctcttcgggcat
ctggccgcgaccgccgtacccggggtggaggagtggcgggacggcgcctaccgccgcacg
ctcaccctgccgaacggccacggaatcgtgtccctggccccccggccggaccacatcgcg
tgccggctgtccctcaccgaccaccgcgacctcaccctcgccatcagcgtctgccgccgg
atgctcgacctcgacgccgacccggtcgccgtggacgaccagctccgcaccgacccgctg
ctcgccccactcgtggacaaggcgccggggcggcgcgtgccgcgcaccgccgacgccgcg
gagttcgcggtacgggccgtcctcggccagcaggtctccaccgcggccgcccgcacccac
gccgcccggctggtcaccgcccacggcacccccgtacaggaccccgagggcggcctcacc
cacctcttccccggaccgggggccctggccgccgccgacccggagcgcctcgcgttcccg
cgcagccggcgtaccgcgctcaccacactcttcggggcactcgccgacggcaggatccgg
ctcggacccggcagcgactgggccgaggcccgcgcccggctctccgcgctgcccggcctc
gggccctggaccgtggaggccatcgccatgcgggcactcggtgacccggacgccttcctg
cccaccgacctcggggtccggcacgccgccgccggcctcggacttccgccgacgcccgcc
gcgctcaccgcccgcgccgctgcctggcggccctggcgcgcctacgccgtccagtacctc
tgggccaccggcgaccacccgatcaaccgtctccctgtctga
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