Streptomyces spongiicola: DDQ41_29695
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Entry
DDQ41_29695 CDS
T06937
Name
(GenBank) cyclodehydratase
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sspo
Streptomyces spongiicola
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspo03009
]
DDQ41_29695
Ribosome biogenesis [BR:
sspo03009
]
Prokaryotic type
ribosomal protein modification factors
DDQ41_29695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AWK12400
LinkDB
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Position
6832717..6834762
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AA seq
681 aa
AA seq
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MTTTAATAAAAGTSASSEAASSSAADTVAGAAPPLGRATAILQDALSARRTVLGGAAPGD
AAVPAPLVVPLGAADVLGTGAPDPYAATRPRANVQLTARAVLIGPWGGTGEAACGQCLAM
RWQRLRSRSEREALERGRPPHGATAWPVITPYAVDAVWAAYRAALGGRLSPPAEAPADRA
LPQVTRVDLGTLATVTFPLLPEPLCPSCVTAVPETADAAPARLRPAPKPDPGRYRLRPAS
SYDLPEQALANPVCGALGARTWINPASTTTAPVAGTNFVRGYAGLNDVTWSGQANSYAAS
RTLARLEGLERYAGTHRRRGTTPVTASYDDLVAAGTPVVDPAARGLYAPQTYARDPLVSP
FDPAREIPWVWGRSLRDDRPVLVPARLAHYSAGTDADNFVFECSNGCATGGSPEEAILFA
LLEIIERDAFLLAWYGRAPLTAIDLRSCRRASIRAMADRAALHGYDVLAHDTTMDLAVPV
VTALAVRRDGGPGTLSFAAAAGFDPEETVESALSEVLTYIPHLPHQVAARRGELLDMARD
YSRVLHLKDHAQLFGLPEMAVHAREFLEPVDVLPLDAVFRGWTDSLRPRTGDLRDDVRFL
VRRIAAAGLDAVVVDQTTPEQRRSGLHTVAMVVPGILPLDFGWSRQRALLMPRLRSGLRD
AGRRPDLLPGPEVRAVPHPFP
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgccgctaccgccgccgctgccggcacctccgcctcctccgaggctgcc
tcctcctccgctgccgacaccgtcgccggggccgcgccaccgctggggcgggccaccgcc
atcctccaggacgccctctccgcccggcgcaccgtactcgggggcgccgcacccggcgac
gccgccgtccccgcaccgctcgtggtgcccctcggcgccgcggacgtgctcggcaccggc
gcccccgacccgtacgccgccacccggccccgggcgaacgtccaactgaccgcccgagcc
gtcctcatcggcccctggggcgggacaggcgaagcggcgtgcgggcagtgcctcgccatg
cgctggcagcgactgcgcagccgctccgaacgcgaggcactcgaacggggccgcccgccg
cacggggccacggcctggccggtgatcaccccctacgcggtcgacgcggtgtgggccgcc
taccgggccgccctgggcggacggctgtccccaccggccgaggccccggcagaccgcgca
cttccccaggtgacccgcgtcgacctggggaccctcgcgacggtgaccttccccctgctc
cccgaacccctctgcccgtcctgcgtcacggccgtccccgagaccgcggacgccgccccg
gcccggctgcgacccgcccccaaaccggaccccggccgctaccggctgcgcccggcctcc
tcgtacgacctccccgagcaggcgctcgccaaccccgtgtgcggggcgctcggcgcccgt
acctggatcaaccccgcctcgaccaccaccgcccccgtcgccgggaccaacttcgtgcgc
ggatacgccggcctgaacgacgtcacctggagcgggcaggccaacagctacgccgccagc
cgcacgctggcccggctggagggtctggaacgctacgcgggcacccaccgccgccgcggc
accacgcccgtgacggcctcgtacgacgacctcgtcgcggcggggacccccgtcgtggac
cccgcggcgcgcggcctctacgccccgcagacctatgcgcgcgacccgctcgtcagcccc
ttcgacccggcccgggagatcccctgggtctggggccgttcgctgcgcgacgaccgcccg
gtgctcgtccccgcccgcctcgcccactacagcgcgggaaccgacgcggacaacttcgtc
ttcgagtgctccaacggctgtgcgaccggcggtagtccggaggaggcgatcctcttcgcc
ctgctggagatcatcgagcgcgacgccttcctgctggcctggtacgggcgcgccccgctc
accgcgatcgacctccgcagctgccggcgcgcctcgatccgcgccatggccgaccgggcg
gcgctgcacggctacgacgtcctcgcccacgacaccaccatggacctcgccgtgccggtg
gtcaccgccctcgccgtccgccgcgacggcggccccggcaccctgtccttcgcggccgcg
gccggattcgaccccgaggagaccgtcgagtccgcgctctcggaggtgctcacctacatc
ccgcacctgccgcaccaggtggcggcgcgccgtggtgaactcctcgacatggcccgggac
tactccagggtgctccatctgaaggaccacgcccagctgttcggcctgcccgagatggcc
gtccacgcgcgggagttcctggagccggtggacgtgctgccgctggacgccgtgttccgc
ggctggacggactccctgcggccgcggaccggcgacctccgcgacgatgtgcgcttcctg
gtccggcggatcgccgccgccggcctcgacgccgtcgtcgtggaccagacgaccccggag
cagcgtcggtcggggctgcacacggtcgccatggtcgtccccggcatcctgccgctggac
ttcggctggtcacgccagcgggccctgctgatgccgcggctgcggagcgggttgcgcgac
gcgggacggcgcccggacctcctgcccggaccggaggtcagggccgtgccgcatccgttc
ccgtga
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