Streptomyces spongiicola: DDQ41_30720
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Entry
DDQ41_30720 CDS
T06937
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sspo
Streptomyces spongiicola
Pathway
sspo00521
Streptomycin biosynthesis
sspo00523
Polyketide sugar unit biosynthesis
sspo00525
Acarbose and validamycin biosynthesis
sspo00541
Biosynthesis of various nucleotide sugars
sspo01055
Biosynthesis of vancomycin group antibiotics
sspo01100
Metabolic pathways
sspo01110
Biosynthesis of secondary metabolites
sspo01250
Biosynthesis of nucleotide sugars
Module
sspo_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sspo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DDQ41_30720 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DDQ41_30720 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DDQ41_30720 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DDQ41_30720 (rfbB)
00525 Acarbose and validamycin biosynthesis
DDQ41_30720 (rfbB)
Enzymes [BR:
sspo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DDQ41_30720 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
adh_short
Statherin
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
AWK12567
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All DBs
Position
7077476..7078429
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AA seq
317 aa
AA seq
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MRILVTGGAGFIGSHFVRSFAGEDELTVVDKLTYAGNPAGLAAVEDRLTFVHGDICDAAL
MAEVVPGHDAVVNFAAESHVDRSIAGAEEFVRTNVLGVQALMQACLDAGVPRIVHVSTDE
VYGSIDSGSWDETAPLSPNSPYAASKAGGDLIALAYARTHGLPVSITRCGNNYGPYQYPE
KVVPLFVTNLLDGLTVPLYGDGTNVRDWIHVADHCRAVRLVADRGEPGEVYHVAGTAELT
NLELTARLLDALGADPRLVERVPDRKAHDRRYSLADAKLRALGYAPSTPFDKGLAETVEW
YTTHREWWEPLKRRGTP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctcgtgaccggcggcgccggtttcatcggctcccacttcgtacggtccttc
gccggcgaggacgagctgaccgtcgtcgacaagctgacctacgccgggaacccggccggc
ctggcggccgtggaggaccgcctcacgttcgtacacggcgacatctgcgacgcggcgctc
atggccgaggtggttcccggccacgacgccgtcgtcaacttcgccgccgagtcgcacgtt
gaccggtcgatcgccggcgcggaggagttcgtccgcaccaacgtcctcggcgtgcaggcc
ctcatgcaggcctgcctcgacgcgggcgtcccgagaatcgtccacgtctccaccgacgag
gtgtacggcagcatcgacagcgggtcctgggacgaaaccgccccgctcagccccaactcc
ccctacgccgcatccaaggccggcggtgatctgatcgcactcgcctacgcccgcacccac
gggctgccggtcagcatcacccgctgcggcaacaactacgggccgtaccagtacccggag
aaggtcgtcccgctcttcgtcaccaacctcctcgacggcctgaccgtcccgctctacggc
gacggcaccaacgtgcgcgactggatccatgtggccgaccactgccgagccgtccggctg
gtcgccgaccgaggggaacccggagaggtctaccacgtcgccggcaccgccgagctgacc
aatctggaactcaccgcccggctgctcgacgcactgggcgccgacccgcgactcgtcgag
cgggtcccggaccgcaaggcccacgaccgccgctactccttggccgacgccaagttgcgg
gcactcgggtacgccccgtccacccccttcgacaagggtctggccgagaccgtcgagtgg
tacacgacccaccgcgagtggtgggagccgctgaagaggcgcgggaccccctga
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