Streptococcus suis D9 (serotype 7): SSUD9_0911
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Entry
SSUD9_0911 CDS
T02022
Symbol
addB
Name
(GenBank) ATP-dependent exonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssq
Streptococcus suis D9 (serotype 7)
Brite
KEGG Orthology (KO) [BR:
ssq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssq03400
]
SSUD9_0911 (addB)
Enzymes [BR:
ssq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSUD9_0911 (addB)
DNA repair and recombination proteins [BR:
ssq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SSUD9_0911 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Phage_integr_3
SVS_QK
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AER17118
LinkDB
All DBs
Position
911577..914843
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AA seq
1088 aa
AA seq
DB search
MKLVYTDIRNPLTQYLTDTSAEFAKEAKRVFYIAPNSLSFEMERKVLEYLPEQATFDIIV
TRFGQLARYLMIDRKEAGQPLDDVGLAMIFFRVLSQFEDGDLKVYGRLQRDFGFINQLVA
LYKELQRANMSILDLEAMDSPDKQADLVKIFLAVTDILSKESFEHQSKLAQLTGLVETGQ
LDEQLKNIVLVVDGFSRFSAEEEALVSALNERVSEILIGVYASKKAVQVIYAEGNVYQAN
VDFLRQLSAQFQTKATYIGQEPVLDSIGKFSKNMEAYYDYSGTMIDLTPADQEKIQLWEV
VNQKEEVEQVATAIRQHIHQGARYKDILLLLGDVDSYKLQIGKIFDKYDIPYYFGKAEEM
SHHPLVHFVESLERLRRYRFRAEDLLNLLKSGLYASISQKELDLFESYILFADMKGQAAF
SRAFSVNGRADYDAEVVKEKRLVYDLAVLEPLRAKIMEPLNQLFKAGPQSGATLLEKFMA
FLEAIEFPKNMEKMSRNLSEVEQEKEEQVWKSFTHLLENFHQIFGKEKLKMDDFLAILQA
GMQASHYRTVPATVDVVNVKSYDLIEPHTAKYVYAIGMGQSNFPKVAKNTSLLTEEEMEK
VNLVSASSSRFDLVSRENIKKNHAAMMSLLNAATEQLVISTPQIYNEGEDSLSPYVKILK
EMGLSSEERGRIKSLSPQDIGHYKSLLSRLIESERPSLDNEEWEGQRAFWTVLVRHLKKK
LESQGIEIPTITGDITSKQLAADTLAALYPEDKPLNLSASSLTNFYNNQYLYFVRNVLRL
REQESIHPTAFQHGLFLHRIFERVVMDQSELDFDQKVDKAILRTRDEAEFAMFYNQDADA
RYTEEVLDKIARSSATILRDNDLVEIDGQEKSFRQDKALVFDLQNGKSVHVNGTIDRLDT
LQINQAVGVVDYKSSDQSFSVGDFYNGLKPQLVTYLAALQELDETKDKPVFGAMYLHLQD
PIIKLKDTKNLEQLEGAANTSLVYKGLFLKEESLGLNHFYQTRNQLYTEDEFAVLLNHNQ
ELYKQAAMDILAGRFAINPYTKDGRSVAGEQLKAITGFEADRHMGMARRLVKEAKRQDWM
ERMKGGQD
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtctatacagatattcgcaatcctctgacgcagtatttaacggatacctcg
gcagaatttgctaaggaagctaagcgagttttttatattgctccaaactctctatccttt
gagatggaacgcaaggtcttggaatacctgccagaacaggcaacttttgatattatcgtg
acccgttttgggcaattggcccgctatttgatgattgataggaaagaagcaggtcaaccg
ctggatgatgttggtctggcaatgattttctttcgtgttctatcgcaatttgaagatggc
gacttgaaagtctatggtcgtttgcagagagattttggtttcattaaccagctagttgct
ttatacaaagaattgcaacgggcaaatatgtctattttggacttggaagccatggactca
ccagataagcaggctgatttggtaaagatttttctggctgtaacagacattttgtccaaa
gaaagctttgagcatcagtctaagttagcacagttgactggcttggtagaaactggtcag
ttggatgagcagttgaagaacattgtgctggtggtagacggattttctcgtttttcggca
gaagaagaagctttagtaagtgctttaaatgaacgggtgtcggaaatcctaattggtgta
tatgccagcaagaaagctgtgcaagtcatctatgcggaaggcaatgtctatcaagccaac
gttgactttttacgtcagctatcagcgcagttccagactaaggctacttatattggtcaa
gagccagtcttggacagtattggtaaattttcaaagaatatggaagcctattatgactac
agcgggaccatgatagacttgactccagcagatcaagaaaaaatccagctatgggaagtc
gttaaccaaaaagaagaggtggagcaggtagcaacggcaattcgccaacacatacaccaa
ggagctcgctataaagacatcttgttgctcttgggtgatgtggatagctacaagttgcag
attggcaaaatttttgacaaatatgatattccctactattttggtaaggcagaggagatg
agccatcatcccctagtccactttgtggagtccttggagcgcttgcgtcgctatcgtttc
cgtgcggaagacctgctcaatctcctcaaatctggtttgtacgccagcatttcccaaaag
gagctggacttgtttgagtcctacatcctctttgcggatatgaaggggcaggctgctttt
tcgagggctttttcggtcaatggcagagcggactatgacgctgaagtcgttaaggagaaa
aggcttgtctatgatttggctgtcttagaacctctacgtgctaagattatggagcctttg
aatcagctgtttaaggctggaccacaatctggagctaccttgcttgagaaatttatggca
tttttggaggcaattgagtttcctaaaaatatggaaaaaatgtctcgaaatttgagtgaa
gtagagcaagaaaaagaagagcaggtctggaaaagttttacccatcttcttgagaatttt
catcagattttcggaaaagaaaaattgaaaatggatgattttctggctattttacaggct
ggcatgcaggccagtcactatcgcaccgttcctgcaacggttgatgtggtcaatgtcaaa
tcctatgatttgattgagccacacactgcaaagtatgtttatgctatcggaatgggccag
tccaattttccaaaagttgccaagaataccagtctgttgacggaagaagagatggaaaaa
gtcaatcttgtttcggcaagttcttcacgtttcgatttggtcagccgagagaatattaag
aagaaccatgctgccatgatgtctctgctaaatgctgcgacggaacagttagttatttcc
actcctcagatttataatgaaggcgaagatagtctttctccttatgtaaaaattctaaaa
gaaatggggctttcgtcagaagaacgtggtcggattaaaagtcttagtccgcaagacatc
ggtcactacaagagtctcttatcccgtttgattgagtcagaaagaccatctcttgataat
gaagaatgggaagggcagagggccttctggacagtcttggttcgccatttgaagaagaaa
ttggagtcgcaaggcattgaaattccgaccattactggtgatattacttctaaacagctt
gcagctgataccttggctgctttatatccagaggataagccgctcaatctttctgcatcc
agcttgaccaatttctacaataaccaatatctttactttgtccgtaatgttcttcgcttg
cgggaacaggaatccatccatccgacggcctttcaacacgggctcttcttgcatcggatt
tttgaacgagtggtcatggaccaatctgagctagattttgatcaaaaagtggataaggcc
atcctgcgtacgcgtgacgaggcagaatttgctatgttttataaccaagatgcggatgct
cgttatacggaggaggtgctggataagattgctcgttccagtgcgactattttgcgggat
aatgatttggttgaaattgatggtcaggaaaagagtttccgtcaggataaggcgctagtt
tttgaccttcaaaatggcaagagtgtgcatgtaaatggtaccattgaccgcttggatacc
ttacaaatcaatcaggctgttggtgttgtggattacaagtccagcgaccaatctttttca
gttggggatttttacaatggtctaaaacctcagttggtaacctacttggcagccttacaa
gagctggatgaaaccaaggataaacctgtttttggagctatgtatttgcatttgcaggat
ccgattatcaaattaaaagacacgaagaatttagaacagctagaaggagctgccaatact
agcttggtttataaggggcttttcttgaaggaggaaagtctggggctcaatcatttttat
cagactcgtaaccaactctacacggaagatgagtttgcggttttattgaaccacaaccaa
gaactctacaaacaagctgccatggacattctggctggtcgctttgctattaacccttat
accaaagatgggcgttcggtggcaggtgagcagctgaaggcaatcactggttttgaggcg
gatcggcacatgggcatggcacggcggttggtcaaggaggccaagcgtcaagattggatg
gaacgaatgaaaggaggtcaggactaa
DBGET
integrated database retrieval system
