Streptococcus suis D9 (serotype 7): SSUD9_0912
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Entry
SSUD9_0912 CDS
T02022
Symbol
addA
Name
(GenBank) ATP-dependent exonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ssq
Streptococcus suis D9 (serotype 7)
Brite
KEGG Orthology (KO) [BR:
ssq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssq03400
]
SSUD9_0912 (addA)
Enzymes [BR:
ssq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SSUD9_0912 (addA)
DNA repair and recombination proteins [BR:
ssq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SSUD9_0912 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
DUF2059
AAA_30
ResIII
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AER17119
LinkDB
All DBs
Position
914843..918496
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AA seq
1217 aa
AA seq
DB search
MAFEQFLSAEEIKAVQLAEANSDKQQKRTPEQIEAIYTHGQNVLVSASAGSGKTFVMVQR
ILDKLKRGVGIDQLFISTFTVKAAGELKERIEKNLNETIAETMDMDLRRHLSAQLADLTK
ADIGTMDSFTQKLVTTYGYSLGISPQFRILQDETEKASLKKEVFDQLFADYLEQDENGAF
RKLVRNFSGNRKDNGGFRQVVYQVHDFSQSTSSPTKWLKEQAVQADLYSQERIELILEQG
FKEKVLDKLYQAADFFRYHVEWGRNDFGSAKYFANVEEVLDLLTGLDSLDQKDLMERVEK
VLLINDQSRGKGLTNANRPKDEHLIAFKEEYNAGKSQIISGLRDLGQEVYELTLLKDYQI
QALPMLILLRDFVLDFSQAYLDVKIKEAAFEFGDIGHFAIRILEENVDIRQFFQEKYHEV
MVDEYQDNNHSQERMLDLLSNGHNRFMVGDIKQSIYRFRQADPMIFQEKFELYQADSQAG
KLILLKENFRSQIEVLEATNAIFTRLMDRQVGEIKYDETHSLVAGSPGQKIAQPKHEMEY
LIYDQQDSANSSTDAEEETPLTAGEIEVVAKEIIRLHNEEGADFKDITLLVQKRTHNDLI
ISIFEKHGIPIVADGGAASYLQSLEVMIMLDTLRVINNPLNDYALVALLKSPMFRFDEDE
LTRISLQAGTGFFYQKMEIAQQTNGQHPELMSGELKKKIKDFLSILENWRAFAKMHSIYD
LIWKIFNEKFYYDYVGALPNGSKRQANLYALGLRANQFEKTGYKGLSRFIVMIDRALAND
KDLADVQEFLPQNAVQLMTIHKSKGLEFKYVFLMNIDKRFNLEDHYQSVIISRKNGLGIQ
YLADMKDKVNSPLPQVRVLMNTLPYQDNLQELKIANLSEQMRLLYVALTRAEKKLYLVGK
GNADKLAKKYDGKKADGVLAQSTRESVATFQDWILAIDEAFSGEDLHFKKVFVTDEDLTE
EKIGKLTLKSKLEDASLKDIRQSEDIAQALDQLSSVQELNERYKVAIELPSLRTPSQIKK
LYEPILEQEGMEVMEKYQPKRTFNLPDFSKKPKITGAQVGSAVHELMQRLDLSWLVTEDT
VREALEAVHAEQAIKDKINVQMILDFFDTDLGREILANTDKLHREAPFASLQTDSVSQEN
FVLRGIIDGYLLYDDHIVLFDYKTDKYDQPSQLSQRYQAQMQLYAEALKKAYKIDRVDCH
LILLGGERIEVVEVKVN
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaacaatttttaagcgcagaagaaatcaaggctgtgcagctggcggaagcc
aattctgataagcaacaaaaacgcacacctgagcagattgaagccatctacacgcacggt
cagaatgttctggtctctgcatcggctgggtcaggaaagaccttcgtcatggttcaacgg
attttggataagttgaagcgtggcgtagggattgatcagctctttatctcgacctttaca
gtcaaagcggctggtgagttgaaggagcggatcgagaaaaatctcaatgaaaccattgcg
gagacgatggatatggacttgcgtcggcatttgtcagcccagttggcggatttgaccaag
gcggatattgggacaatggactcctttacgcagaaattggtaacgacttacggttatagc
cttggcatttctccacagtttcggattttacaggatgagacagaaaaagcgagtctgaaa
aaagaggtttttgaccagctctttgcagattatcttgaacaggatgaaaatggtgcattc
cgaaaattggtacgcaatttttcaggcaaccggaaggataatggtggtttccgtcaggtt
gtttatcaggtgcatgattttagccaatcgacaagcagtccaactaaatggctgaaagag
caggctgttcaagctgatttgtacagtcaagagcgtatagagctgatcttagagcaaggc
tttaaggaaaaagtgttagacaagctctatcaagctgcagatttcttccgctaccatgtg
gaatggggcagaaatgactttggttccgccaagtattttgcaaatgtggaagaagtttta
gatttgctgacaggtttagatagtctggaccagaaggacttgatggagcgggttgaaaaa
gtccttcttatcaacgaccagtccagaggcaagggtctgaccaatgccaatcgaccaaaa
gatgagcatttgatagcctttaaagaagaatacaatgctggcaagagccagattatctct
ggactacgagatttggggcaggaagtttatgaattaaccctgctgaaagactatcagatt
caagctttgccaatgctgatattattacgtgactttgtcttggatttttcgcaggcttat
ctggatgtcaaaatcaaggaagcagcttttgaatttggcgatattgggcatttcgctatt
cgtattttagaagaaaatgtggacattcgccagtttttccaagaaaaataccacgaagtc
atggtggacgagtaccaggataacaaccatagccaagagcgaatgctggacctgctgtct
aacggtcacaaccgctttatggtgggcgatattaagcagtccatctatcgattccgtcag
gcggatccgatgattttccaagagaaatttgaactttaccaggcagattctcaggctgga
aaattgattttgcttaaggaaaatttccgtagtcagattgaggtcttggaggcgacaaat
gctattttcacgcgcctgatggaccgtcaagtaggggaaatcaagtatgatgaaacccac
agtctagtggctggtagtcctggtcaaaaaattgcccagcccaagcatgagatggaatac
ttgatttacgaccagcaggatagcgcaaactcttcaacggatgctgaggaagaaacacct
ctgactgctggtgaaatcgaggttgttgcaaaagagattattcgtcttcacaatgaagaa
ggagcagacttcaaggacatcactctcttggtgcaaaaacggacgcacaatgacctcatt
atatccatttttgaaaaacatgggattccaattgtggcagatggcggagcagcctcctat
ctgcaatctttagaagtcatgattatgctggataccttgcgggttatcaataatccactc
aatgactatgccttggttgctcttctcaaatcgcctatgttccgattcgatgaggatgag
ctgacacggatttccttgcaggctgggacaggtttcttttaccagaaaatggaaatagcc
cagcaaacaaatgggcaacatcctgaacttatgtcaggagagttgaagaagaaaatcaag
gatttcttatctattttggaaaactggcgtgcttttgccaaaatgcattctatttatgac
ctgatttggaagattttcaatgaaaaattctactatgactatgtcggtgctcttccaaat
ggcagcaagcgtcaggcaaatctatatgccctaggtttgcgtgccaaccagtttgaaaaa
acaggctacaagggcttgtctcgtttcatcgtcatgattgaccgtgccttagcaaatgac
aaggacttggcagatgtacaagagtttctaccgcaaaatgctgttcagctgatgaccatt
cataagtcaaaaggtctagagttcaaatatgtcttcctcatgaacatcgataaacgattc
aacttggaagaccattaccagtcagtcatcatcagccggaaaaatggtctaggtatccaa
tatttagcggatatgaaagataaggtgaatagcccattacctcaggtgcgagtcttaatg
aacacccttccttatcaagataatctccaagagctaaaaattgccaatctttcagaacaa
atgcggttgctttatgttgcactaacgcgtgccgagaagaagctgtatctggttggaaag
ggcaatgctgataagttagctaaaaaatacgatggcaaaaaggcagatggcgtactagcc
caatcaactcgtgaaagcgtggcgaccttccaagactggattctagccattgatgaggcc
ttctcaggagaagacttgcacttcaagaaagtctttgtgacggatgaggatttgacagag
gagaagattggaaaacttacattgaagagtaagctagaagatgccagccttaaagatatt
cgtcaatcagaagacattgctcaggccttggaccagttgtcttctgttcaagagttgaac
gaacgctataaggttgccattgaattgccaagtttacggactccaagtcaaatcaagaaa
ctctatgagcctattttggaacaagaaggcatggaagttatggaaaaataccagccaaaa
cggaccttcaacttgccagatttctccaagaaacctaaaatcactggagcccaagtcggt
tcagcagtgcatgaactcatgcaacgcttggatctgtcttggttggtgacagaagatacg
gtaagagaagccctagaagctgttcatgctgagcaagcgattaaagataaaatcaatgtt
cagatgattttggatttctttgatacagacttaggaagagaaattctagccaatacggac
aaactccaccgagaagcaccatttgcaagtttgcagacagattctgtatctcaggaaaac
tttgtccttcgtgggattatagatggctacctactatatgatgatcatattgtcctcttt
gattacaagacagacaaatatgaccaaccaagccaactcagccaacgttaccaagctcaa
atgcaactctatgccgaggcattgaaaaaagcctacaagatagatcgtgtagactgccat
ttgattttgcttggtggggagagaatagaagtggtcgaagtcaaggtaaactaa
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integrated database retrieval system
