Streptococcus suis D9 (serotype 7): SSUD9_1492
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Entry
SSUD9_1492 CDS
T02022
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ssq
Streptococcus suis D9 (serotype 7)
Pathway
ssq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSUD9_1492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssq03019
]
SSUD9_1492
Messenger RNA biogenesis [BR:
ssq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSUD9_1492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
SUFBD_core
Motif
Other DBs
NCBI-ProteinID:
AER17676
LinkDB
All DBs
Position
complement(1483433..1485094)
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AA seq
553 aa
AA seq
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MSTIKIMALGGVRENGKNLYIAEVNEHIFVLDAGAKYPENEQLGVDVVVPNFDYLEENKH
RVAGVFLSHGHADAIGALPYLLEKVKVPVFGSHLTIELAKLLVKGNNATKKFNDFHVINA
ETEIDFGDSVVSFFQTTHSIPESLGIVVKTDEGNIVYTGDFKFDQAADKFYRTDFGRLAE
IGNEGVLALLSDSANADSNVQVASMHEAGEEILNTIADCDGRVIVAAVASNIVRIQQIFD
AAEATGRRVVLTGHDVENIVRTAIQLKKLRLVSERLLVKPKDMNKYEDHELIILETGRMG
EPLNGLRKMSIGRHRYVEIKEGDLVYIVTTPSISKEAVVARVENLIYKAGGTVKSITKNL
RVSGHGNARDLQLMLNIMKPKYLFPVQGEYRQLDAHAKAALEIGMYPENIIIVKRGDVMA
FEEGDFVHSGAVPAGDVMIDGNAMGDVGNIVLRDRKILSEDGIFIVAITVNRREKKIISK
AKVNTRGFVYVKKSKDILREASELVNTTVENYFTKDSFDWAELKSAVRDDLAKFLFDQTK
RRPAILPVIMEVK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaattaaaattatggctcttgggggtgtgcgggaaaatggaaaaaacctgtac
attgccgaagtgaatgaacatatttttgttttggatgcaggggcaaagtatcctgagaat
gaacagttaggtgtggatgtagtcgtcccaaatttcgattatttggaagaaaataagcat
cgtgtagcaggggtctttttatctcacgggcatgcagatgctatcggagcgcttccttat
ctcttggagaaagtgaaagtgccagtatttggttcgcacttgactatcgaattggctaag
ctacttgtcaaggggaataatgctactaagaaatttaatgatttccatgttatcaatgct
gaaactgaaattgatttcggagattcagtggtatctttctttcagacgacccactctatt
ccagagagtttaggaattgtcgttaagacggatgagggaaatattgtctacacaggtgac
tttaagtttgaccaggcggcagataagttttatcgtacggattttgggcgattggctgaa
atcggtaacgaaggtgtgttggccctcttgtcagactcagctaatgcagatagcaatgtt
caagtagcgagcatgcatgaggctggggaggaaattctcaatacgattgctgactgtgac
gggcgtgttattgtggcagcagttgccagcaatattgtacgtattcaacagatttttgac
gcggcagaagcaactggtcgtcgtgtcgtgttgacaggacatgatgtggaaaacattgtc
cgaacagcgattcaattgaaaaaacttcgtttggtcagcgaacgcttgttggtaaaacca
aaggatatgaacaagtatgaagaccatgaattgattattttagaaactggtcgtatgggc
gagccgttaaatggattgcgtaaaatgtctatcggtagacatcgctacgttgaaatcaaa
gaaggtgatctagtttatattgttaccactccaagtatttcaaaagaagcggttgttgct
cgtgtggagaacttgatttacaaggctggtggtaccgtaaaatctatcacaaagaatctt
cgcgtctctgggcatgggaatgctcgtgatttgcagctcatgctcaacatcatgaagcct
aaatatcttttcccagttcaaggggagtatcgtcaattggatgctcacgctaaggctgcg
cttgaaattggtatgtatccagaaaacattatcatcgttaagcgtggggatgtcatggct
tttgaagagggggattttgtccatagcggagcggttcctgctggtgatgtcatgattgac
ggaaatgccatgggcgatgttggaaatatcgtccttcgtgaccgtaaaatcctatcagaa
gacggtatctttatcgtggctatcactgtcaaccgccgtgagaaaaaaatcatttctaaa
gccaaggtcaatactcgtggttttgtctacgtgaaaaagagcaaggacatcttgcgtgag
gcatcagaattggtgaatacaacggtggaaaattactttacaaaggatagctttgactgg
gcagagcttaagagtgctgttcgcgatgatttagcaaaattcctctttgaccaaactaaa
cgtcgcccagctattttgccggtaattatggaagtcaagtaa
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