Streptococcus suis D9 (serotype 7): SSUD9_1745
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Entry
SSUD9_1745 CDS
T02022
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ssq
Streptococcus suis D9 (serotype 7)
Brite
KEGG Orthology (KO) [BR:
ssq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssq03019
]
SSUD9_1745
03009 Ribosome biogenesis [BR:
ssq03009
]
SSUD9_1745
Enzymes [BR:
ssq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SSUD9_1745
Messenger RNA biogenesis [BR:
ssq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSUD9_1745
Ribosome biogenesis [BR:
ssq03009
]
Prokaryotic type
rRNA helicases
SSUD9_1745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AER17915
LinkDB
All DBs
Position
complement(1715666..1717009)
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AA seq
447 aa
AA seq
DB search
MKFTDMKLKPYIQEALKEINFVQPTEVQEKLIPVVLSGRDLIGESKTGSGKTHTFLIPIF
QKLSEELDQVQAVITAPSRELATQIYQAARQLASHSDIEVRVTNYVGGTDKNRQIDKLQA
SQPHIVVGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF
MVFSATIPQKLQPFLKKYLSNPVMEQIKTHTVISDTIENWLISTKGHDRNAQILEVTKLM
QPYLAMIFVNTKTRADELHSYLTANGLRVAKIHGDIPPRERKRMMNQVKNLDYQYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLSGIAITLYQPSDDADIRELEKL
NIKFLPKEMKNGEFVDTYDRDRRANREKSREKLDLEMIGLVKKKKKKVKPGYKKKIQWAV
DEKRRKTKRVEARAKGRAERKAKRQTF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagatatgaaactcaagccttatattcaggaggctttgaaagaaattaac
tttgtccagccgacagaagttcaggagaaattgattcctgttgttttatcagggcgagac
ttgataggggaatcaaaaacaggttcgggtaagacccataccttcttgatccctattttc
caaaaattaagtgaggaattggaccaagttcaggctgttattacagccccatctcgtgaa
ttagctactcagatttatcaagcggcacgccagttggcaagtcattcggacatcgaagtt
cgtgtgaccaattatgttggcggtacggataagaaccgtcaaattgacaagcttcaagct
agtcagcctcacattgttgttgggacaccagggcgtatctatgatttggtcaaatcaggt
gaccttgctatccataaagccaaaacctttgtggttgatgaggcagatatgaccttggac
atgggctttttggaaacagttgataagattgctggcagcctgccaaaagacttgcaattt
atggtcttttcagcgaccattccgcagaaactccaaccgtttttgaaaaaatacctgtcc
aatccagtcatggaacaaatcaagacccatacggtcatttcagataccattgaaaactgg
ctgatttcaaccaaggggcatgaccgtaatgctcaaatcttggaagtaaccaagctcatg
caaccttacttggccatgatttttgtcaatacaaagacacgtgcagatgaattgcatagc
tatttgactgcgaacggtcttcgtgtcgcaaagattcatggggatattcctccacgtgag
cgcaagcggatgatgaaccaggtgaagaacttggactatcagtacattgttgcaacggat
ttagcagcacgtgggattgatattgagggcgtcagtcatgtcatcaatgatgccattcca
caggatctttccttctttgttcaccgtgtggggcgcacaggtcgtaatggtttatcaggc
attgccattaccctttatcagccaagcgatgatgcagatattcgagagctagaaaaactc
aatatcaaattcttgccaaaagaaatgaaaaatggcgaatttgtcgatacctacgaccgt
gaccgccgtgctaaccgtgaaaaatctcgtgaaaaactagatttggaaatgattggcttg
gtcaagaagaaaaagaaaaaagtcaaaccaggctacaagaagaaaattcaatgggctgtt
gatgaaaaacgtcgcaagaccaagcgagttgaagcgcgtgcaaagggtcgtgcagaacgt
aaagccaagcgtcaaaccttttaa
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