Streptococcus suis D9 (serotype 7): SSUD9_2020
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Entry
SSUD9_2020 CDS
T02022
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ssq
Streptococcus suis D9 (serotype 7)
Brite
KEGG Orthology (KO) [BR:
ssq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssq03019
]
SSUD9_2020
Messenger RNA biogenesis [BR:
ssq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSUD9_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AER18180
LinkDB
All DBs
Position
complement(1996515..1997456)
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AA seq
313 aa
AA seq
DB search
MKINQMKKDEFFEGFYLIKTADVRQTRAGKDYLALTFQDDTGEIEGKVWDAQPGKIKDFT
AGTVVHMQGRREVYNNTPQVNQLVLRLPKAGEPNDPADFKEKPPVDVKDTKDYLSQMIFR
IENATWQRIVRALYSKYDKEFYSYPAAKTNHHAFYSGLSFHTATMVRLADKIGDIYPQLN
KSLLFAGIMLHDLAKVIELTGPDNTGYTVRGNLIGHISLIDEEITKVLMELGIDDSLEEV
TVLRHVILSHHGLLEYGSPVRPQIMEAEILHMIDNIDAEMMMMLSALDKVGPGEMTNRIF
AMDNRAFYKPKLG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaccaaatgaaaaaagatgaattcttcgaaggattctatctcatcaagacc
gcagatgtccgtcaaacacgagctggcaaagactacctagctctgaccttccaagatgat
acgggcgagattgaaggcaaggtctgggatgcccaaccagggaaaatcaaagactttact
gctggaactgttgttcacatgcagggtcgccgtgaggtttacaacaacaccccccaggtc
aatcaactggttcttcgtttgccaaaggcaggcgagcccaacgaccctgctgatttcaag
gaaaaaccacctgtggatgtcaaggacaccaaggactatttgagccagatgattttccgc
attgaaaatgccacttggcagcggattgtccgtgctctttacagcaagtacgacaaggaa
ttctattcctatccagcagccaagaccaatcaccatgccttctactcaggcttgtccttc
catacagcgaccatggtacgcttggcagataaaattggtgacatctatccccagctcaac
aagagcctgctctttgcaggaatcatgcttcatgacctagccaaggtgattgaactgaca
ggtcctgataacacaggctacactgtccgtggcaatctgattggtcacatttccttgatt
gatgaagagattaccaaggtcttgatggaattgggcatcgatgacagtctggaggaagtg
actgttctgcgccacgttatcctcagccaccatggcctcttggagtatggcagtcctgtc
cgtccgcagattatggaggcagaaatcctccacatgattgacaacatcgatgcggaaatg
atgatgatgctatcggccttggacaaggtcggcccaggcgagatgaccaaccgcatcttt
gccatggataaccgcgccttctataagcccaagttaggatag
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