Streptococcus salivarius CCHSS3: SALIVB_0223
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Entry
SALIVB_0223 CDS
T01580
Symbol
groL
Name
(GenBank) 60 kDa chaperonin (protein Cpn60) (groEL protein)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SALIVB_0223 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssr03019
]
SALIVB_0223 (groL)
03110 Chaperones and folding catalysts [BR:
ssr03110
]
SALIVB_0223 (groL)
03029 Mitochondrial biogenesis [BR:
ssr03029
]
SALIVB_0223 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssr04147
]
SALIVB_0223 (groL)
Enzymes [BR:
ssr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SALIVB_0223 (groL)
Messenger RNA biogenesis [BR:
ssr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SALIVB_0223 (groL)
Chaperones and folding catalysts [BR:
ssr03110
]
Heat shock proteins
HSP60 / Chaperonin
SALIVB_0223 (groL)
Mitochondrial biogenesis [BR:
ssr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SALIVB_0223 (groL)
Exosome [BR:
ssr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SALIVB_0223 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SALIVB_0223 (groL)
Exosomal proteins of breast cancer cells
SALIVB_0223 (groL)
Exosomal proteins of colorectal cancer cells
SALIVB_0223 (groL)
Exosomal proteins of bladder cancer cells
SALIVB_0223 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Tubulin
DUF4142
Motif
Other DBs
NCBI-ProteinID:
CCB92539
LinkDB
All DBs
Position
206518..208137
Genome browser
AA seq
539 aa
AA seq
DB search
MAKDIKFSSAARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIE
LEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIE
AAVATAVEELKAIAQPVANKEAIAQVAAVSSRSEKVGEYISEAMERVGNDGVITIEESRG
METELEVVEGMQFDRGYLSQYMVTDNEKMVADLDNPFILVTDKKISNIQDVLPLLEEVLK
TSRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAVLTGATVIT
EDLGLELKDATMAALGQASKVTVDKDSTVIVEGAGSTEAIANRVNLIKSQLETTTSEFDR
EKLQERLAKLSGGVAVVKVGAATETALKEMKLRIEDALNATRAAVEEGIVAGGGTALVNV
IAKVAELDLEGDDATGRNIVLRALEEPVRQIAYNAGYEGSVIIDKLKNSPVGTGFNAANG
EWVDMVAAGIIDPVKVTRSALQNAASVASLILTTEAVVANKPEPEAPAAPAMDPGMMGY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatattaaattttcatcagctgcacgcgcagcaatggtccgtggtgttgat
actttggctgatacagttaaggtaacgcttggtcctaaaggtcgtaacgtggttttggaa
aaagcttttggctcacctcttatcactaatgatggtgtgacaattgctaaagaaattgaa
ctcgaagatcactttgaaaatatgggtgctaagctcgtcagcgaagtggcttcaaaaacg
aacgatattgccggtgacggaacaacgacagccactgttttgacacaggctattgtccgt
gaaggtctcaaaaatgtaacggctggtgctaatccaatcggtatccgtcgtgggattgaa
gcagctgtagctacagcggttgaagagcttaaagctattgcacaaccagttgctaataag
gaagccattgcccaagtcgcagcggtttcatcacgttctgaaaaagttggtgaatacatt
tcagaagcgatggaacgtgttggtaatgatggtgttatcactattgaggagtctcgtggt
atggagactgaactcgaagtggttgaaggtatgcagtttgaccgtggttatctttctcag
tacatggttactgataatgaaaagatggtcgctgaccttgataatccatttatccttgtg
actgacaagaaaatttcaaatattcaggatgttcttccactcttggaagaagtgcttaag
acaagtcgtccactcttgattattgctgatgacgtggatggtgaagctcttcctacgctt
gttcttaacaagattcgtggaactttcaatgttgttgctgttaaggcacctggctttggt
gaccgtcgtaaagcgatgttggaagacattgccgtattgacaggagcaactgtcattact
gaggatcttggtcttgagcttaaggacgcaactatggcagcacttggtcaagcttcgaaa
gtaactgtggataaagatagcacagttatcgttgaaggtgcaggaagcacagaagcgatt
gctaaccgtgttaacctcatcaagtctcaattggaaacaacaacatctgaatttgaccgt
gaaaaacttcaagaacgtttggctaaattgtcaggtggggttgcagttgttaaggttggt
gcggccactgaaacagcccttaaagaaatgaaacttcgtatcgaagatgcccttaacgct
actcgtgccgctgttgaagaaggtatcgtagcaggtggtggtacagctcttgttaacgtc
attgctaaggttgctgaacttgatcttgaaggtgacgacgctacagggcgtaatattgtc
ctccgtgccttggaagagccagttcgccaaattgcttataacgctggttatgaaggttca
gttatcatcgataaattgaagaacagcccagttggtacaggctttaacgctgctaacggt
gaatgggtagatatggtcgcagcaggaattatcgaccctgttaaggtcacacgttctgcc
ctccaaaatgctgcttctgtagcaagtcttatcttgacaaccgaggcagtcgttgccaac
aaacctgaaccagaggctccagcagcaccagctatggatccaggaatgatgggttactaa
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