Streptococcus salivarius CCHSS3: SALIVB_0616
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Entry
SALIVB_0616 CDS
T01580
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssr
Streptococcus salivarius CCHSS3
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_0616 (sbcC)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALIVB_0616 (sbcC)
Archaeal homologous recombinant proteins
SALIVB_0616 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
ABC_tran
FtsK_SpoIIIE
SMC_N
Motif
Other DBs
NCBI-ProteinID:
CCB92916
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All DBs
Position
636110..639289
Genome browser
AA seq
1059 aa
AA seq
DB search
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVSLFATTSGDRN
VEEMRSTFASPEDDLTKVTFYFQQGNHLYRIERILQQERAKRGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLDAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDGHFASQVWSEEELAVLAQTPASEKLLRL
EDLLAQRQENLEEQKSILKDAHEDLAKLQKSLQTAQDVAKIFQELEQAKERYRLEIEEGA
QEQAEAKVHLEELQFAQGLQETISSLKQYQKQLLQVEHDLEIAQEELKAKEQAFEEVKAQ
KVALAAQTEDFLQKEEKLEAWKEAIIYAQSLAQEQEKIKRSSANYKQLEETYQQASKEIE
SLNKSLTDLEANRLSLESLHEAEKLLQSVGYSVDKQLDQDLKELEGLNQELAKTEKRHQT
LSLDSDQAQEILNELEEKLRTTLALRRQLMIAQLQAELEDGQPCMVCGSLDHPKVDGTQA
DEAALKDLMDQVEELQAQKEKQVAALSNYQARLSEVESKRQDLLDQVAKVKLSLQKHYQE
LEEQVKGQFDFDFSEDYEAVRGQALLSAVEKHYQELQKRYDKEEADRVHYQEELAKAREK
TIDLAKDYQEAKATLYQAKERLKDLKEAHPELESVEVYQERISLAKQELDLYNKQVKENS
ESYNQLHADIQGIKGQLESLTKSKEKTSQEMKRLSAELDQSLKVEGALTNDLEQIQLWLL
EVNKQAIPKLQAQLTSYQTLKQELQTQISKGQALLQNQEKPDLAALTQEVQTSQKSYDTQ
SAQVSVMEKGLKDATATYQAAKNLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAITVLEQIGE
NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSRIKIVDKG
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagaccagtccagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcacccagtttgaccatgctcctctctttttgattggtggggacacgggggctggtaag
agtactctctttgatgccatgacagtgtccttgtttgcgacaaccagtggtgatcgtaat
gtcgaggagatgcggtcgaccttcgctagtccagaggatgatttgaccaaggtgactttt
tacttccaacaaggtaaccatctttaccgcattgagcgaattctccagcaggagagggcc
aagaggggtggtggtacgaccatgcaaaaagcaacggcttctctagtcattgtagataag
attggtggtcaagaaattgaaaagcttggggataaaatcaaggaagtgagtgaccagatt
gagcagattttgggtctcgatgctgagcagttcaaacagattatccttcttccgcaaaat
gatttcagtcgtttcttgaaagaagattccaagaccaagactcaaattttgaagaaaatc
tttggaacgggtatttttgaccgttttcaaaagagtttggaagagcgtcttcgtcagagt
aataaggatatggataagcgccaggctcagctagatggccattttgccagtcaggtttgg
tctgaggaggaattagctgttctggcccaaacgccagcctctgaaaaattgttacgtctt
gaagaccttttggcacaacgtcaagaaaatcttgaagagcagaaaagcattttgaaggat
gcccatgaggatttggctaagctgcaaaagagcttacaaactgcacaagatgtagcaaag
attttccaagaattggagcaagccaaggagcgttaccgtctggaaattgaggaaggtgct
caggaacaggcagaggctaaagtgcatctggaggaattgcagtttgcccaagggttgcag
gaaaccattagtagcttgaagcagtatcagaagcagttgttgcaagtagaacatgacctt
gaaattgctcaggaggaattaaaggctaaggagcaggcttttgaggaagtcaaggctcaa
aaagtggcacttgcagctcagactgaggattttcttcaaaaagaagagaaactggaagcg
tggaaagaggctattatctatgcccagagtcttgcccaagagcaggagaaaatcaaacgg
tcgagtgctaactacaagcagttggaagaaacttatcagcaggcttcgaaagagattgag
tctctaaacaagtctttgacagatttggaggccaatcgtcttagtttagagagtttacat
gaggctgaaaaactcctccagtctgtgggctacagtgtggataagcaactggatcaggat
ttaaaagaattagagggcttgaatcaggagttggcaaagacggaaaaacgtcatcaaacc
ttatctttggatagtgaccaagctcaagaaatcttaaatgaattggaagagaagttaaga
acgactttggctttacgtcgtcagctcatgattgcccagttgcaggcagagttagaagat
ggacagccctgtatggtctgtggttccttggatcatcctaaggtcgatgggacacaggct
gatgaagcggccttgaaggatctcatggatcaggtggaggaacttcaagctcaaaaagaa
aagcaagttgctgccttgtcaaattatcaggctagattgagtgaagttgagtctaaacgt
caggatttgcttgaccaagtggctaaagttaagttatctcttcaaaaacactatcaagaa
ctcgaagagcaagttaagggacagtttgattttgatttttcagaagactatgaagctgtc
cgtgggcaagccttgttgagtgctgttgagaagcattatcaagaactccaaaaacgctat
gataaggaagaggcagaccgtgtccattatcaagaggagttagctaaggctcgagaaaaa
acgatagatttggctaaggactatcaagaggccaaggcaactctctatcaagctaaggag
cgcctaaaagacttgaaggaagctcatccagaactggagtctgtagaggtctatcaagaa
cgaatttcccttgcgaagcaggagttggacctctacaataagcaggttaaggaaaatagt
gaatcctacaaccaacttcatgccgacattcaaggcatcaaggggcagcttgagagcttg
accaagtctaaagaaaagaccagccaagaaatgaaacgtttatcagctgagttggaccaa
agtcttaaggtcgaaggtgccctcaccaatgacctagagcaaatccagctttggctgctt
gaggtgaacaagcaggctattcctaagcttcaggctcaattgacaagttaccaaaccctt
aaacaagaattgcagacccagattagtaagggccaagcgcttcttcaaaatcaagaaaaa
ccagatttggccgctttaacccaagaggtccaaaccagtcagaaaagttacgatacgcaa
tcagctcaggtctctgtcatggagaagggacttaaggatgcgacggctacttatcaagca
gcaaaaaaccttcaagacagcaatcaagaggcctttaaggcccaccaagaactcagtgat
ttggttaaggtggttaagggagaaaatactgctctaactggtcgtctcaatcttgaggtc
tatgttatccgtcagtatttccaacaaatcttggactatgccaatgccaactacatcggt
cttttaacagataaccgttattcctttgtcttgagcgaggaaggtcgcagggcgcgtgat
cacttcggtttggatattaacgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgccgcactggccattgccctatccctctcggaa
gttgtgcaaaataccagcaagggtgccgttgttgaagccctcttcatcgacgaaggtttc
ggttcactagataaagaggccctcaccaaggctatcacggtcctagaacaaatcggtgaa
aaccgaatggtcggagtcatcagccatgtggacgacatgaaagaaggcattgctcagcaa
ctagccatcatcaagtcgcacgatggtagcagtcgcattaaaattgtagataaggggtaa
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integrated database retrieval system