Entry |
|
Symbol |
sbcC
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Name |
|
KO |
K03546 | DNA repair protein SbcC/Rad50 |
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Organism |
ssr Streptococcus salivarius CCHSS3
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Brite |
KEGG Orthology (KO) [BR:ssr00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ssr03400]
SALIVB_0616 (sbcC)
DNA repair and recombination proteins [BR:ssr03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SALIVB_0616 (sbcC)
Archaeal homologous recombinant proteins
SALIVB_0616 (sbcC)
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
636110..639289
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AA seq |
1059 aa
MRPVQLELTNFGPYRKEVINFTQFDHAPLFLIGGDTGAGKSTLFDAMTVSLFATTSGDRN
VEEMRSTFASPEDDLTKVTFYFQQGNHLYRIERILQQERAKRGGGTTMQKATASLVIVDK
IGGQEIEKLGDKIKEVSDQIEQILGLDAEQFKQIILLPQNDFSRFLKEDSKTKTQILKKI
FGTGIFDRFQKSLEERLRQSNKDMDKRQAQLDGHFASQVWSEEELAVLAQTPASEKLLRL
EDLLAQRQENLEEQKSILKDAHEDLAKLQKSLQTAQDVAKIFQELEQAKERYRLEIEEGA
QEQAEAKVHLEELQFAQGLQETISSLKQYQKQLLQVEHDLEIAQEELKAKEQAFEEVKAQ
KVALAAQTEDFLQKEEKLEAWKEAIIYAQSLAQEQEKIKRSSANYKQLEETYQQASKEIE
SLNKSLTDLEANRLSLESLHEAEKLLQSVGYSVDKQLDQDLKELEGLNQELAKTEKRHQT
LSLDSDQAQEILNELEEKLRTTLALRRQLMIAQLQAELEDGQPCMVCGSLDHPKVDGTQA
DEAALKDLMDQVEELQAQKEKQVAALSNYQARLSEVESKRQDLLDQVAKVKLSLQKHYQE
LEEQVKGQFDFDFSEDYEAVRGQALLSAVEKHYQELQKRYDKEEADRVHYQEELAKAREK
TIDLAKDYQEAKATLYQAKERLKDLKEAHPELESVEVYQERISLAKQELDLYNKQVKENS
ESYNQLHADIQGIKGQLESLTKSKEKTSQEMKRLSAELDQSLKVEGALTNDLEQIQLWLL
EVNKQAIPKLQAQLTSYQTLKQELQTQISKGQALLQNQEKPDLAALTQEVQTSQKSYDTQ
SAQVSVMEKGLKDATATYQAAKNLQDSNQEAFKAHQELSDLVKVVKGENTALTGRLNLEV
YVIRQYFQQILDYANANYIGLLTDNRYSFVLSEEGRRARDHFGLDINVYDQLTGSERSVK
SLSGGETFIAALAIALSLSEVVQNTSKGAVVEALFIDEGFGSLDKEALTKAITVLEQIGE
NRMVGVISHVDDMKEGIAQQLAIIKSHDGSSRIKIVDKG |
NT seq |
3180 nt +upstreamnt +downstreamnt
atgagaccagtccagttagaattgaccaattttggaccttatcgtaaggaagtcatcaat
ttcacccagtttgaccatgctcctctctttttgattggtggggacacgggggctggtaag
agtactctctttgatgccatgacagtgtccttgtttgcgacaaccagtggtgatcgtaat
gtcgaggagatgcggtcgaccttcgctagtccagaggatgatttgaccaaggtgactttt
tacttccaacaaggtaaccatctttaccgcattgagcgaattctccagcaggagagggcc
aagaggggtggtggtacgaccatgcaaaaagcaacggcttctctagtcattgtagataag
attggtggtcaagaaattgaaaagcttggggataaaatcaaggaagtgagtgaccagatt
gagcagattttgggtctcgatgctgagcagttcaaacagattatccttcttccgcaaaat
gatttcagtcgtttcttgaaagaagattccaagaccaagactcaaattttgaagaaaatc
tttggaacgggtatttttgaccgttttcaaaagagtttggaagagcgtcttcgtcagagt
aataaggatatggataagcgccaggctcagctagatggccattttgccagtcaggtttgg
tctgaggaggaattagctgttctggcccaaacgccagcctctgaaaaattgttacgtctt
gaagaccttttggcacaacgtcaagaaaatcttgaagagcagaaaagcattttgaaggat
gcccatgaggatttggctaagctgcaaaagagcttacaaactgcacaagatgtagcaaag
attttccaagaattggagcaagccaaggagcgttaccgtctggaaattgaggaaggtgct
caggaacaggcagaggctaaagtgcatctggaggaattgcagtttgcccaagggttgcag
gaaaccattagtagcttgaagcagtatcagaagcagttgttgcaagtagaacatgacctt
gaaattgctcaggaggaattaaaggctaaggagcaggcttttgaggaagtcaaggctcaa
aaagtggcacttgcagctcagactgaggattttcttcaaaaagaagagaaactggaagcg
tggaaagaggctattatctatgcccagagtcttgcccaagagcaggagaaaatcaaacgg
tcgagtgctaactacaagcagttggaagaaacttatcagcaggcttcgaaagagattgag
tctctaaacaagtctttgacagatttggaggccaatcgtcttagtttagagagtttacat
gaggctgaaaaactcctccagtctgtgggctacagtgtggataagcaactggatcaggat
ttaaaagaattagagggcttgaatcaggagttggcaaagacggaaaaacgtcatcaaacc
ttatctttggatagtgaccaagctcaagaaatcttaaatgaattggaagagaagttaaga
acgactttggctttacgtcgtcagctcatgattgcccagttgcaggcagagttagaagat
ggacagccctgtatggtctgtggttccttggatcatcctaaggtcgatgggacacaggct
gatgaagcggccttgaaggatctcatggatcaggtggaggaacttcaagctcaaaaagaa
aagcaagttgctgccttgtcaaattatcaggctagattgagtgaagttgagtctaaacgt
caggatttgcttgaccaagtggctaaagttaagttatctcttcaaaaacactatcaagaa
ctcgaagagcaagttaagggacagtttgattttgatttttcagaagactatgaagctgtc
cgtgggcaagccttgttgagtgctgttgagaagcattatcaagaactccaaaaacgctat
gataaggaagaggcagaccgtgtccattatcaagaggagttagctaaggctcgagaaaaa
acgatagatttggctaaggactatcaagaggccaaggcaactctctatcaagctaaggag
cgcctaaaagacttgaaggaagctcatccagaactggagtctgtagaggtctatcaagaa
cgaatttcccttgcgaagcaggagttggacctctacaataagcaggttaaggaaaatagt
gaatcctacaaccaacttcatgccgacattcaaggcatcaaggggcagcttgagagcttg
accaagtctaaagaaaagaccagccaagaaatgaaacgtttatcagctgagttggaccaa
agtcttaaggtcgaaggtgccctcaccaatgacctagagcaaatccagctttggctgctt
gaggtgaacaagcaggctattcctaagcttcaggctcaattgacaagttaccaaaccctt
aaacaagaattgcagacccagattagtaagggccaagcgcttcttcaaaatcaagaaaaa
ccagatttggccgctttaacccaagaggtccaaaccagtcagaaaagttacgatacgcaa
tcagctcaggtctctgtcatggagaagggacttaaggatgcgacggctacttatcaagca
gcaaaaaaccttcaagacagcaatcaagaggcctttaaggcccaccaagaactcagtgat
ttggttaaggtggttaagggagaaaatactgctctaactggtcgtctcaatcttgaggtc
tatgttatccgtcagtatttccaacaaatcttggactatgccaatgccaactacatcggt
cttttaacagataaccgttattcctttgtcttgagcgaggaaggtcgcagggcgcgtgat
cacttcggtttggatattaacgtctatgaccagctgacaggtagtgaacgctccgttaaa
tccttgtctggtggtgaaacctttatcgccgcactggccattgccctatccctctcggaa
gttgtgcaaaataccagcaagggtgccgttgttgaagccctcttcatcgacgaaggtttc
ggttcactagataaagaggccctcaccaaggctatcacggtcctagaacaaatcggtgaa
aaccgaatggtcggagtcatcagccatgtggacgacatgaaagaaggcattgctcagcaa
ctagccatcatcaagtcgcacgatggtagcagtcgcattaaaattgtagataaggggtaa |