Streptococcus salivarius CCHSS3: SALIVB_0887
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Entry
SALIVB_0887 CDS
T01580
Name
(GenBank) UPF0042 protein stu0831
KO
K06958
RNase adapter protein RapZ
Organism
ssr
Streptococcus salivarius CCHSS3
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssr03019
]
SALIVB_0887
Messenger RNA biogenesis [BR:
ssr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SALIVB_0887
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_14
AAA_16
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCB93180
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Position
983520..984410
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AA seq
296 aa
AA seq
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MGTKKINLVVVTGMSGAGKTVAIQSFEDIGYFTIDNMPPSLVPKVIELVKHSEETDKIAL
VIDMRSRLFFDEINDILDKLESNEELNFKILFLDATDGELVSRYKETRRSHPLAADGRVL
DGIKLERELLSPLKSLSQNVVDTTELTPRQLRKAISEQFSSEQDQSSFRIEVVSFGFKYG
LPLDADLVFDVRFLPNPYYDPALRNLTGLDKEVFDYVMNHKESEEFYNHLTQLIKPILPG
YKKEGKSVLTIAVGCTGGQHRSVAFAHRLAQDLKNDWTVNETHRDKDRRKETVNRS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgaaaaaaattaatttagttgttgtaacagggatgagtggtgcaggtaagact
gtggccattcaatcctttgaggatattggatacttcaccattgataatatgccaccttct
ttggtacctaaggttatcgaattggtaaaacatagtgaagagacagataagattgctctt
gtcattgatatgcgcagtcgcttgttcttcgatgagatcaacgatattctggataaattg
gaaagcaatgaggaacttaatttcaagattctattcttggatgccacggatggtgaattg
gtttctcgttataaagagacacgtcgtagtcacccactggcggcagatggccgtgttttg
gatggcatcaagctagagcgtgagcttttgtcaccgcttaagagtttgagtcagaacgtg
gttgatacgacagaattaactccacgccagctgcgtaaggctatttctgaacagttctca
tctgaacaagaccaatcttctttccgtattgaagttgtgagttttggttttaaatatgga
ttgccattggatgcagatttggtttttgatgttcgtttcttgccaaatccttattatgat
cctgcacttcgtaacctcacaggtttggataaagaggtttttgattatgtcatgaaccat
aaggaatcagaagagttttacaatcatttgacacagcttattaaaccaatcttgcctggc
tacaaaaaagaaggtaagtctgttctcactattgctgttgggtgtacaggtggtcagcac
cgtagtgtagcttttgcacatcgtctggcccaagatttaaaaaatgattggacagtcaat
gaaacacatcgtgataaggatcgacgtaaggagacagtgaatcgttcatga
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