Streptococcus salivarius CCHSS3: SALIVB_0926
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Entry
SALIVB_0926 CDS
T01580
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssr
Streptococcus salivarius CCHSS3
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssr03032
]
SALIVB_0926 (topA)
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_0926 (topA)
Enzymes [BR:
ssr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SALIVB_0926 (topA)
DNA replication proteins [BR:
ssr03032
]
Prokaryotic type
DNA Topoisomerases
SALIVB_0926 (topA)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SALIVB_0926 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
HypA
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCB93218
LinkDB
All DBs
Position
1017674..1019818
Genome browser
AA seq
714 aa
AA seq
DB search
MATATTTKTKTKTTKKKTAKKATKKRATPKKNLVIVESPAKAKTIEKYLGRNYKVVASVG
HIRDLKKSSMSIDFENNYEPQYINIRGKGPLINELKKEAKKAKQVFLASDPDREGEAISW
HLSHILGLEPDDKNRVVFNEITKDAVKNAFVEPRAIDMDLVDAQQARRVLDRIVGYSISP
LLWKKVKKGLSAGRVQSVALKLIIDRENEIKAFKPEEYWTIDGAFKKGAKKFQASFYGLD
GKKLKLNNNEDVQAVLSRITSDDFNVDKVEKKERRRNAPLPYTTSSLQQDAANKINFRTR
KTMMVAQQLYEGINLGSGAQGLITYMRTDSTRISPVAQNQAAEFITERFGSKYSKHGSKV
KNSSGAQDAHEAIRPSNVFQTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVT
LSQNGVIFTANGSQIKFDGYMAVYNDSDKNKMLPDMAEGDTVKKVVTTPEQHFTQPPARY
SEATLIKTLEENGVGRPSTYAPTLDVIQRRYYVKLVAKRFEPTELGEIVNSLIVEFFPDI
VDVKFTAEMEGKLDKVEIGKEQWQKVIDEFFKPFQKELEKAEEGIEKIQIKDEPAGFDCD
LCGHPMVIKLGRYGKFYACSNFPDCHNTKAITKEIGVTCPTCGKGQVIERKTKRNRVFYG
CDRYPDCEFTSWDIPVGRNCPKSGDYLVEKKVRGGGKQVICSNEECDYKESIVK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcaacgacaacaaaaacgaaaactaaaacaacaaagaaaaagacagccaaa
aaggcgactaaaaagagagcgacaccaaagaaaaatttggtcatcgtggagtctcctgct
aaagcgaaaacgattgagaagtatcttggccgcaactataaagttgtagcctctgttggg
catattcgtgatttgaaaaaatcaagtatgtctattgattttgaaaacaactacgaacct
cagtacattaatattcgtggtaagggacctcttatcaatgaattgaagaaagaagctaaa
aaagccaagcaagtctttctcgcaagtgacccggaccgtgaaggggaagccatttcatgg
catttgtcacatattcttggattagagccagatgataagaatcgtgtcgtttttaacgaa
atcactaaagatgcagtaaaaaatgcctttgtagagccacgcgccattgacatggacttg
gtagatgctcagcaagctcgtcgtgtcttggaccgtattgtgggttactctatttcaccg
cttctatggaagaaggttaagaaaggtctttctgcaggtcgtgtacaatcagtagcgctt
aagcttattattgaccgtgaaaatgaaattaaggcctttaaaccagaagaatactggact
attgatggtgcctttaagaagggtgctaagaagtttcaggctagcttctatggcttagat
ggtaaaaagcttaagctcaacaataatgaggatgttcaagccgttctctctcgtatcaca
agtgatgactttaacgtagataaagtagagaaaaaagaacgccgtcgtaatgcgccattg
ccatatacaacttcatctctccaacaggatgctgctaataagattaacttccgaacacgt
aagaccatgatggttgctcaacagttgtatgaaggaattaatttgggttcaggagctcaa
ggtttgattacctatatgcgtacggactctacacgtatcagtccagtggcacaaaaccag
gctgctgaatttattacagaacgctttggttctaagtattcaaaacatggcagcaaggtg
aaaaatagttcgggagcacaagacgcccatgaggctattcgtccgtcaaatgttttccaa
acaccagaaagcatcgctaagtatttggataaggatcagcttaagctctatactcttatc
tggaatcgttttgtagcgagtcaaatgacagctgcagtatttgatacgatgaaggtgacc
ttgtctcaaaacggagtcattttcactgcaaatggtagccaaatcaagttcgatggttat
atggccgtttacaacgattctgataagaacaaaatgcttcctgatatggcagaaggtgat
acggttaagaaggttgtgacaacgcctgaacaacacttcacgcaaccacctgcccgctat
tctgaagcgactctgattaagacgctggaagaaaatggtgttggtcgtccgtcaacttat
gcaccgacacttgatgttattcaacgtcgttactatgttaaattagtagctaaacgtttt
gaaccaacagaacttggtgaaatcgttaatagcttaatcgtcgaattcttccctgacatc
gtggatgttaaattcactgccgagatggaaggaaaactcgataaagttgaaatcggtaaa
gagcagtggcaaaaggttattgatgagttcttcaaacctttccaaaaagaattggaaaaa
gctgaagaaggtattgaaaaaatccaaatcaaggatgagccagctggttttgattgtgac
ctctgtggtcacccaatggtcatcaaacttggtcgatatggtaagttttatgcatgtagt
aacttcccagattgtcacaatactaaagccataaccaaagaaattggcgttacttgtcca
acctgtggtaaaggtcaggtcatcgaacgtaagacaaaacgaaatcgtgtcttctatggt
tgtgatcgctatcctgactgtgaatttacatcgtgggatatccctgttggacgtaactgt
cctaaatcaggcgattatcttgtcgagaagaaagtccgtggtggcggcaagcaagttatc
tgtagtaacgaagagtgtgactacaaagaatctattgttaaataa
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