Streptococcus salivarius CCHSS3: SALIVB_1029
Help
Entry
SALIVB_1029 CDS
T01580
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B (tRNA pseudouridine 55 synthase) (Psi55 synthase) (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssr
Streptococcus salivarius CCHSS3
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssr03016
]
SALIVB_1029 (truB)
Enzymes [BR:
ssr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SALIVB_1029 (truB)
Transfer RNA biogenesis [BR:
ssr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SALIVB_1029 (truB)
Prokaryotic type
SALIVB_1029 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF4537
Motif
Other DBs
NCBI-ProteinID:
CCB93318
LinkDB
All DBs
Position
1120118..1120960
Genome browser
AA seq
280 aa
AA seq
DB search
MTSHDAVFKLRKILQEKKIGHGGTLDPDVTGVLPIAVGKATRVIEYMTEAGKVYEGEITI
GFSTTTEDASGEIVQTTPVTELDEEAVDKAMASFEGEITQIPPMYSAVKVNGKKLYEYAR
AGEEVERPQRQVTITEFVRTSPIELENDTARFTFRVACSKGTYVRTLSVDFGVKLGYASH
MSALRRTASAGLTLDKALTLSQISEMVEAGDTSFLLPIEFGVQDLPAVQVTEDDAKEISF
GRFIAIDSQEPLVAAFLGDKVLAIMEKRNQVYKPRKVLSQ
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtcatgatgctgtatttaaactacgcaaaatattacaggagaaaaaaatcgga
catggtggtactctcgatcctgatgtgactggtgttctacctatagcggttggaaaagct
actcgtgttattgaatacatgactgaagcagggaaagtctatgagggagaaattaccatt
ggcttttcgacaactaccgaggatgctagtggagaaatcgtccaaaccactccagtaaca
gagcttgatgaagaagccgttgacaaagcaatggccagttttgagggagaaatcacacaa
attccccctatgtattcagcagttaaggtcaacggaaagaaactttatgagtacgcacgc
gctggagaagaagtagaacgtccacaacgtcaagtgaccattaccgaatttgtccgtacc
tcacccatcgagctagaaaacgacactgcgagattcaccttccgtgttgcttgtagcaag
ggaacctatgtccgtaccttatctgtcgattttggtgttaaactcggctacgcgagtcat
atgtctgctcttcgtcgaacagcctcagctggtctaaccttagataaggcactaacactc
tcacaaatttcagaaatggtagaagcaggggatacatccttcctccttcccatcgaattc
ggtgttcaggatctgccagcagtacaggttactgaagatgatgctaaagaaatctcattt
ggtcgctttattgctattgatagccaagaaccattggttgcggcctttttaggagacaaa
gttctagccatcatggaaaagcgaaatcaagtttataaacctagaaaagtattaagtcaa
tga
DBGET
integrated database retrieval system
