Streptococcus salivarius CCHSS3: SALIVB_1312
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Entry
SALIVB_1312 CDS
T01580
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03030
DNA replication
ssr03430
Mismatch repair
ssr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SALIVB_1312 (holA)
03430 Mismatch repair
SALIVB_1312 (holA)
03440 Homologous recombination
SALIVB_1312 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssr03032
]
SALIVB_1312 (holA)
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_1312 (holA)
Enzymes [BR:
ssr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SALIVB_1312 (holA)
DNA replication proteins [BR:
ssr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SALIVB_1312 (holA)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SALIVB_1312 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
CCB93591
LinkDB
All DBs
Position
complement(1416339..1417373)
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AA seq
344 aa
AA seq
DB search
MIAMETIEKLSKEKLPMITVLAGEDLGQYSQAKEKFLKQIGFDPSDLTYSYFDMSETDYQ
DAELDLESMPFFADEKVVIFDHFADMTTAKKSYLDEKELKRLENYLESPVETTRLVLMSA
GKLDGKRRLVKLLKRDATVLEASPLKDAELRTYFQKQAHQEGLTFDTGVFEELLIKSNFD
FSDVQKNLAFLKGYKTEGNISSQDIAEAIPKSLQDNIFDMTQLLLRGQIQSVRELVHDLR
LQGEDEIKLIAVMLGQFRTYLQVKLLSAQGKSDQQIVSSLSDYLGRKVNQFQVRFALRDS
RPLSVAFLKKTIKILVETDYQIKTGTLDKDYLFDLALLKIVSNR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattgctatggaaacgattgaaaagctgtctaaagaaaagctccccatgataacggtc
ttggcgggcgaggatttagggcagtatagtcaagctaaagaaaaatttttaaaacaaatt
ggttttgatccgagtgacttaacctattcttattttgatatgtctgagactgattatcaa
gatgctgagctcgatttagaaagcatgcctttttttgcagatgagaaggtggtcattttt
gatcatttcgcggatatgactactgctaaaaaatcgtatctggatgagaaagagttgaag
cgccttgaaaattatcttgagtctcctgttgaaacaacacgtcttgtcttgatgtctgca
ggaaagctagatggaaagcgtcgtttagtcaaacttctcaaacgtgatgccacggtgctt
gaagccagtcctttaaaagatgcagaacttagaacctattttcaaaagcaggcgcatcaa
gaggggcttacatttgatacaggagtctttgaggaacttttgattaagtcaaattttgac
ttttcagatgttcaaaaaaacttagcttttctaaaggggtataaaacggaaggaaatatc
tcatcgcaagatattgctgaggccattcctaaaagtttgcaagataatatttttgatatg
acgcaacttcttttgcgaggccagatccagagtgttcgtgaattggttcatgatttacgg
cttcagggtgaagatgagattaagttgattgctgttatgttgggacaatttcgtacctat
ttacaggttaaactcttatctgctcaaggcaaaagtgatcagcaaattgtttcaagtctg
tcagattatttagggcgtaaagtcaatcaatttcaggttcgttttgcactgagagatagc
cgtcctttgtcagtagcattcttaaaaaagacgattaagattttagtagagacagattac
cagataaaaacaggaactttagataaagattacttgtttgatttagcacttttaaaaatc
gtatcaaaccgctag
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