Streptococcus salivarius CCHSS3: SALIVB_1597
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Entry
SALIVB_1597 CDS
T01580
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03030
DNA replication
ssr03430
Mismatch repair
ssr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SALIVB_1597 (holB)
03430 Mismatch repair
SALIVB_1597 (holB)
03440 Homologous recombination
SALIVB_1597 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssr03032
]
SALIVB_1597 (holB)
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_1597 (holB)
Enzymes [BR:
ssr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SALIVB_1597 (holB)
DNA replication proteins [BR:
ssr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SALIVB_1597 (holB)
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SALIVB_1597 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
VWA_4
Motif
Other DBs
NCBI-ProteinID:
CCB93862
LinkDB
All DBs
Position
complement(1688542..1689417)
Genome browser
AA seq
291 aa
AA seq
DB search
MKLAESQSKLFEEFSQIIRENRLSHAYLFSGDFGSLDMAIWLAQSRFCLTPEDGLPCGHC
RPCRLIAQGDFSDVKLVEPQGQIIKTDTIRQLTREFSQSSFEGQAQVFIIRDADKMHINA
ANSLLKFIEEPQSQIYIFLLTADDSRMLPTIKSRAQLFYFPKNRAYLEELLQKEGLLLTQ
AKVLADFAKDDVQALDLAKDNKILDLINTVERFTQSLLSNQDLLYLDVAKLAVQCSEKSE
QEMVWAFLTYQMGKDIQNPQARRWLDLVYEARKMWLANVSFQNAMEYMVLS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaagttagctgaaagtcaaagcaaactatttgaagagttttcacaaattatcagggaa
aatcgtttgagtcatgcttatttgttttcgggtgattttggaagtctcgacatggctatt
tggctagcacagagtcggttttgcctaactcctgaggatggtctaccttgtggccactgt
cgtccctgtcgcttgattgcacagggggacttttctgatgttaaattagtagagccacaa
ggacagattattaagacggacacgattcgtcagttgaccagagagtttagtcaatcaagt
tttgaggggcaggctcaggtttttatcattcgtgatgcagataagatgcatatcaatgct
gctaatagtctattaaagtttattgaagaacctcaaagtcagatttatatttttcttttg
acagctgatgatagtcgtatgttacctacgattaaaagccgagctcaactcttttatttt
ccaaagaatcgggcatatctggaagaattgctgcagaaggaaggcttgttgctgacacaa
gccaaagtgttggcggactttgctaaagatgatgttcaggctttagacttagctaaagat
aataagattcttgatctgattaatacagtagagcgtttcacacagtccctgctatctaat
caggacctgctttatttggacgttgcaaaactggctgtccagtgtagtgaaaagtcggaa
caagagatggtctgggcttttttaacttatcaaatggggaaggatatacaaaatccacaa
gcaaggcgatggctagacttagtttatgaggcacgaaaaatgtggctagctaatgtcagc
tttcaaaatgcgatggagtatatggtattatcatga
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