Streptococcus salivarius CCHSS3: SALIVB_1666
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Entry
SALIVB_1666 CDS
T01580
Symbol
exp9
Name
(GenBank) putative ATP-dependent RNA helicase exp9 (Exported protein 9)
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ssr
Streptococcus salivarius CCHSS3
Pathway
ssr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SALIVB_1666 (exp9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssr03019
]
SALIVB_1666 (exp9)
03009 Ribosome biogenesis [BR:
ssr03009
]
SALIVB_1666 (exp9)
Enzymes [BR:
ssr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SALIVB_1666 (exp9)
Messenger RNA biogenesis [BR:
ssr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SALIVB_1666 (exp9)
Ribosome biogenesis [BR:
ssr03009
]
Prokaryotic type
rRNA helicases
SALIVB_1666 (exp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
DUF6363
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCB93927
LinkDB
All DBs
Position
complement(1755990..1757576)
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AA seq
528 aa
AA seq
DB search
MKFTDLNLSEDIQSAVVAAGFEKPSPIQELTIPLALEGKDVIGQAQTGTGKTAAFGLPTL
DKIRTEENTIQALVIAPTRELAVQSQEELFRFGRDKGVKVRSVYGGSSIEKQIKALRSGA
HIVVGTPGRLLDLIKRKALKLNNIETLILDEADEMLNMGFLEDIEAIISRVPEERQTLLF
SATMPDAIKRIGVQFMKDPEHVKIKAKELTNVNVDQYFIRVKEQEKFDTMTRLMDVDQPE
LSIVFGRTKRRVDELTRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGQSGQSITFVAPNEMGYLGIIENLTKK
RMKGLKPPTAQEAFQAKKKVALKKIERDFADEAIRSNFDKFKGDAVKLAQEFTPEELALY
ILSLTVQDPETMPEVEIAREKPLPFKPSGGGFGGKGGKGGRGNRGRDNNRRGGYRGDRNR
DDRDGGRRDFKRKSKKNSRDFENRGNKRPHRTSSEKKNGFVIRNKGDK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacagatttaaacctatcagaagacatccaatcagctgttgtagctgccggt
tttgaaaaaccatcacctatccaagagttgacaattccactcgctcttgaaggtaaggat
gttatcggtcaggcccaaactggtactggtaaaacagctgcctttggtttgcctacccta
gataaaattcgtacagaagaaaatacaatccaagcccttgttattgccccaacacgtgag
ttggcagtgcaatctcaagaagagcttttccgttttggtcgtgacaaaggcgttaaagtt
cgctcagtctacggtggttctagcattgaaaaacaaatcaaggcccttcgttcaggtgcc
cacatcgttgtagggacaccaggtcgtctccttgaccttatcaaacgtaaggctcttaaa
ctcaataacatcgagactttgattttggatgaagctgatgaaatgcttaacatgggcttc
cttgaagacattgaagctatcattagccgagtaccagaagaacgtcaaactctccttttc
tcagcaactatgcctgatgccatcaaacgtattggtgtgcagttcatgaaagaccctgag
catgtgaaaatcaaggctaaagaattgaccaatgttaacgttgaccaatactttatccga
gtgaaggaacaagagaagtttgataccatgactcgccttatggatgttgaccaaccagaa
ttgtcaattgtctttggtcgtaccaaacgtcgtgtggacgagttgacacgtggcttgaaa
cttcgtggtttccgtgcagagggtatccacggtgaccttgaccaaaacaaacgtcttcgt
gttatccgtgacttcaagaacgaccaaatcgatatcttggttgcgacagacgttgcagcg
cgtggtcttgacatttcaggtgtcactcacgtctacaactacgatattccacaagatcca
gaaagctacgttcaccgtattggacgtacaggacgtgcaggccaatcaggtcaatctatt
actttcgtagcaccaaacgaaatgggttacttgggaatcatcgaaaacttgaccaagaaa
cgcatgaaaggtcttaagccaccaacagctcaagaagccttccaagctaagaagaaagtt
gcccttaagaagatcgaacgcgactttgcggatgaagctatccgttctaactttgacaag
ttcaagggtgatgcggtaaaattggctcaagaattcactcctgaagaattggcactttac
atcttgagcttgaccgttcaagacccagagacaatgccagaagtggaaattgcccgtgaa
aaaccattgccattcaaaccatcaggtggtggctttggtggtaaaggcggcaaaggtggc
cgtggcaaccgtggtcgcgataacaaccgtcgtggtggataccgtggcgaccgtaaccgc
gatgaccgagatggtggccgtcgtgacttcaaacgcaagtctaagaagaatagccgtgac
ttcgaaaaccgtggcaataaacgcccacaccgtacctcaagcgaaaagaaaaacggcttt
gttatccgtaacaagggtgataaataa
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