Streptococcus salivarius CCHSS3: SALIVB_1825
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Entry
SALIVB_1825 CDS
T01580
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
ssr
Streptococcus salivarius CCHSS3
Brite
KEGG Orthology (KO) [BR:
ssr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssr03400
]
SALIVB_1825
Enzymes [BR:
ssr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SALIVB_1825
DNA repair and recombination proteins [BR:
ssr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SALIVB_1825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD_C
Spectrin_7
Motif
Other DBs
NCBI-ProteinID:
CCB94083
LinkDB
All DBs
Position
complement(1909248..1912568)
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AA seq
1106 aa
AA seq
DB search
MKLLYTDMSQDLTEILTEQATSYAQKGKRVFYIAPNALSFEKERKVLEYLPQSASFEITV
TRFTQMARYFILNTSNPKTQLDDTGLAMIFYKVLSHMGDDELKVYGRLRKDSNFINQLVG
LYKELQQANMTVLDLQHLDQVEKQEDLLRIFSAAQDLLLAGDFDNQSKLSAFFKEITSGH
LDKALGNTVLVIDGFTRFSAEEEALVALLNDKCHQIVIGTYASQKAYRANFVYGNVYQAS
VDFLRTLAQTYKVTPDYVTTDKEGNPSFARISRLLESRHDFSTVDEQLTDQDKQALQVWE
VVNQKEEVAQVAKSIRQLLADGKRYKDILVLLGDEESYKLQVGQIFRKFDIPYYFGKEES
MSSHPLVQFVDSLERIKRYNYRAEDLLNLVKSGLYGGFAQEDLDLFEYYVNFADIKGRHK
FLSDFTADSRDKYDLDQLNTLRSQLVEPLDKLLNSRKQKGSSLLKKLVVFLEAVQLPSQM
ASLTAKASEAEKEQNEQVWNAFTQLLEQVETIFGEETLSVDDFLSILRSGMLACDYRTVP
ATVDVVNVKKYDLIQPHSAPYVFALGMTQSHFPKVGQNKSLLSDEERSRINEVTDEDRSL
DIVTQSNSQRGHFVAMSLFNSASEQLVLSQPQILNETQDDMSVYLKELLDLGLSLVEKGR
NRFEAKGDQIGNYKDLLSTVIALNSSHLDADLDKETQTFWSVAVRYLRKRLDKDQVLIPN
VIDDVTTTKVDDQVMQLVFPGEEPLKLSASALTTFYNNQYLYFLRYVLGLEELESIHPDA
RHHGTYLHRVFERVMGDSSSENFDDKLEKAIAQTNQEQPFEILYTEDQESHLSRQILEDI
ARSTASVLRDNAAVKVEREEAKFDLLLANSIKITGIIDRVDRLTDGALGVVDYKSGKNVF
DIQKFYNGLSPQLVTYLEALRQTYKVDADQLFGAMYLHMQDPQLNLAQFGLDKLAAQAHK
ELTYKGLFVASETEHLAGGNYDLQKTVTYDKEDLETLLDYNIKLFTSAAEVIRSGNFAVN
PYTEDGKSVQGDQIKAITHFEADRHMGQARKLLRLPSKGKKEAYLELMGKDEDDNEMQVA
EKIVPFPVTDQAVTADNKDQEDNHVD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactttatacggatatgtctcaggatttaacagaaattctgacggagcaggca
accagctatgctcaaaagggaaagagggtattttatattgcccctaatgccctgtcattt
gagaaggagcgtaaggtcttggaatacctgcctcagtcagcatcctttgagattacggtg
actcgttttactcagatggcgagatactttattctcaatacgagcaaccccaaaacgcag
ctggatgatactggtctggccatgattttttataaggtgttgtcgcatatgggcgatgat
gagctcaaggtttatggccgtttgcgcaaggatagtaactttattaatcaattggtaggc
ctttataaagagttgcagcaggctaatatgacggttctggatttgcagcatttggatcag
gttgaaaaacaagaggatttgctcaggattttcagtgcggctcaggatctcttgttggca
ggagattttgacaatcaatcaaaacttagtgccttcttcaaggaaattacctcaggacat
ctggataaggcactgggtaacacggttttggtcattgatggctttacgcgtttctctgcc
gaggaggaggccctagttgctctcttgaatgataagtgccaccagattgtcattgggact
tatgccagtcaaaaagcttatagggctaactttgtttatggcaatgtttatcaggcctca
gtggattttttgagaactttggctcagacctataaggtgacacccgactatgtaacgaca
gacaaagagggcaatccttcttttgcgcgcattagccgtcttttggagagccgtcatgat
tttagtacggtagatgagcagttgaccgatcaagacaagcaagccttgcaggtctgggaa
gtggtcaaccaaaaggaagaggtggctcaggttgccaagagtattcgtcagttgctggca
gatggcaagcgctataaggatatcttggtcctgcttggtgatgaggagagttataagctt
caggtgggtcagattttccgaaaatttgatattccctattatttcggtaaggaagaaagc
atgtctagccatcctttggtgcagtttgtggattcgctggaacgtatcaaacgctacaat
tatcgtgctgaggatctgcttaatctcgtaaaatccggtctctatggtggttttgctcaa
gaggacttagatctttttgagtattatgtcaattttgcagacatcaaggggcgtcacaag
ttcttgtctgattttacggccgatagtcgtgataagtatgatttagaccagctcaatacc
ttgcggtcacagttggtagagcccttggacaagttgcttaatagtcgcaaacaaaagggt
tctagtctactcaagaaactagtggtctttttagaggctgtgcaattgccaagccaaatg
gctagtttgactgccaaggccagtgaggctgaaaaagaacagaatgaacaggtctggaat
gctttcacacaactcttggagcaggttgagactatttttggagaagaaacactgtcagtg
gacgactttttgtccattttgcgttcaggaatgttggcctgtgattaccgtacggtccca
gccactgtcgatgtggtcaatgtgaaaaaatacgatttgattcaaccacattctgctcct
tatgtttttgccttggggatgacccagtcacattttcctaaggtagggcaaaataagagt
ctcctgtctgacgaggaacgtagtcgtatcaatgaggtgacggatgaagacaggagtttg
gatattgttacgcagagcaatagtcagcgggggcattttgtggctatgtcactttttaat
tcggctagtgaacaattggtgcttagtcagccacaaattctcaatgagactcaagatgac
atgtcggtttatttgaaagagctgcttgaccttggtctttctttggttgaaaagggacgt
aatcgtttcgaggccaagggtgaccagattgggaactacaaggacctcctatcgactgtc
attgcccttaacagtagccatttagatgctgatttggataaggaaacgcagactttctgg
tcagttgctgtgcgttatctccgtaagcgacttgataaggaccaagtcttgattccaaat
gtgattgacgatgtgacgacgaccaaggttgatgatcaggtcatgcagctggtctttccg
ggggaagaaccactgaaattatcagcctcggctctgacgaccttctataacaaccaatat
ctttatttcttgcgttatgttttggggcttgaagagttggagtccatccatccagatgct
cgacaccacgggacttatttgcaccgtgtctttgagcgtgttatgggggattcttcgtca
gaaaacttcgatgataaattggaaaaggctattgctcagaccaatcaggaacaacctttt
gaaattctctatacggaggaccaagagagtcacttgtctcgtcagattttggaagatatc
gcccgttcaactgccagtgttttgcgtgataatgcggctgttaaggttgagcgtgaggaa
gccaagtttgatttgcttttagcaaatagcatcaagattacagggattattgaccgtgtg
gaccgtttaacggatggggctctgggtgtcgttgactacaaatcaggtaaaaatgtcttt
gacattcagaaattctacaatggtctcagtccgcagttggtaacctatctggaggccctt
cgacaaacctataaggtggatgctgatcagctttttggtgccatgtatcttcacatgcag
gacccacaacttaacttagctcagtttggtctggataagctagcagctcaggctcataag
gaattaacctataagggactttttgtggcttcagaaacagagcatttggctggtggaaac
tatgatttacaaaagactgtcacctatgacaaggaggacctagaaaccttgctcgattac
aatattaagctctttacaagtgctgctgaagttattcgaagtgggaattttgcggttaat
ccttatactgaggatggcaagtctgttcaaggggatcaaatcaaggctattactcatttt
gaggctgaccgtcacatgggacaggcgcgaaaactcttgcgtttaccaagcaagggcaag
aaggaagcctatttggagctgatgggaaaagatgaggacgataatgagatgcaagttgct
gaaaaaatcgtcccctttccagtcactgatcaagctgtgacagcagacaacaaagaccag
gaggacaaccatgttgactaa
DBGET
integrated database retrieval system
